Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence98.41%DateThu Jan 5 12:10:53 GMT 2012
Rank19Aligned Residues192
% Identity16%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20........ .30.........40......... 50.........60.........70.........80........
Predicted Secondary structure 



..










.
















Query SS confidence 
















. .




















.






































Query Sequence  ECALTAQQNGADRVELC. . AAPKEGGLTPSLGVLKSVRQR. VTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFP
Query Conservation    
  
   







..
 
  





 
        .  


 





 


 

  
   
  

      


Alig confidence 
















..




















.








......







......









Template Conservation 
 
      
   


 
 

 
      
   
  
             ...... 
      ......
      


Template Sequence  DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHL. . . . . . MVKPVDAL. . . . . . IESFAKAGAT
Template Known Secondary structure  TT


BSSSSS
B


T

S
......
SS
......T
S
Template Predicted Secondary structure 























......



......



Template SS confidence 















































































   20.........30.........40.........50.........60......... 70....... ..80.......
 
   8990.........100.........110.........120.........130.........140.........150. ........160...
Predicted Secondary structure 
























.....

Query SS confidence 






























































. . . . .











Query Sequence  GLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQK. . . . . SDALQGLSKIME
Query Conservation 
 


 
  

 

      

  
    







   
   

  

 

  





  .....  
  
   
  
Alig confidence 










......













































.....











Template Conservation   
         ......           
    
 
   
              
       
           
  
  
Template Sequence  SIVFHPEASEH. . . . . . IDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFQKFIPAMLDKAKEISK
Template Known Secondary structure 
GGG
S
......TTTS
TT

SGGGTTTGGG
S
S
TT




TT
Template Predicted Secondary structure 



......




















Template SS confidence 















































































   88.90........ .100.........110.........120.........130.........140.........150.........160.
 
   164.....170.. .......180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 



.







































Query SS confidence 








.





































































Query Sequence  LIAHRDAPI. IMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKGII
Query Conservation 
   
    .

 



   

  
  

    
 
      
        
         
     

   
      
Alig confidence 








.

























.............








...........










Template Conservation            
   


           


 



.............


    

...........   
  
   
Template Sequence  WISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAG. . . . . . . . . . . . . SAIFNSDSY. . . . . . . . . . . KQTIDKMRDEL
Template Known Secondary structure  TS

SS

TTTTTT

S.............TSS
...........
Template Predicted Secondary structure 












.............



...........
Template SS confidence 















































































   164.....170.........180.........190......... 200........ .210.........
 
   243..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  ERH
Query Conservation     
Alig confidence 


Template Conservation     
Template Sequence  NKV
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 


   220..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions