Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence59.50%DateThu Jan 5 12:10:53 GMT 2012
Rank321Aligned Residues92
% Identity18%Templatec3i5aA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120.........130.........140.........150.........160.........170 ...
Predicted Secondary structure 




























...
Query SS confidence 









































































. . .


Query Sequence  VDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDA. . . PII
Query Conservation   

 

      

  
    







   
   

  

 

  





    
  
   
  
   
  ...  
Alig confidence 























......


























.















...


Template Conservation 

       
   
       
  ......
  
  

  
     



 

 

 .


 

   

       



Template Sequence  DDQAMIGEAVRRGLAGHESIDFHF. . . . . . CADPHQAIAQAVQIKPTVILQDLVMPG. LDGLTLVREYRSNPLTRDIPII
Template Known Secondary structure 
S
T
TT......

TTS

SSS
SS.S
STTTTTS
Template Predicted Secondary structure 







......










.







Template SS confidence 















































































   23......30.........40...... ...50.........60.........70... ......80.........90.....
 
   174.....180.........190.....
Predicted Secondary structure 







Query SS confidence 





















Query Sequence  MAGAGVRAENLHHFLDAGVLEV
Query Conservation 
 



   

  
  

    
Alig confidence 





















Template Conservation   

          
   

 

Template Sequence  VLSTKEDPLIKSAAFAAGANDY
Template Known Secondary structure  SS

TT
S
Template Predicted Secondary structure 









Template SS confidence 





















   96...100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions