Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence89.89%DateThu Jan 5 12:10:53 GMT 2012
Rank156Aligned Residues119
% Identity13%Templatec3gndC_
PDB info PDB header:lyaseChain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50 .........60.........70.........80.........
Predicted Secondary structure 















...















Query SS confidence 





































. . .






































Query Sequence  CALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRV. . . TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPG
Query Conservation   
  
   








 
  





 
         ... 


 





 


 

  
   
  

      



Alig confidence 





































...











........


















Template Conservation 


 


 




 
    
   
   
     
   
   




 
     ........
 
 
  




 




 
Template Sequence  SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVVR. . . . . . . . DQRYFSLATRIAAEMGAQI
Template Known Secondary structure 
TT
S
TTSTTT





........
T
S
Template Predicted Secondary structure 

















........



Template SS confidence 















































































   126...130.........140.........150.........160.........170........ .180.........190.......
 
   90.........100.........110.........120.........130.........140.........150.........160.......
Predicted Secondary structure 


























..
Query SS confidence 













































































. .
Query Sequence  LVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAH. .
Query Conservation   


 
  

 

      

  
    







   
   

  

 

  





    
  
   
  
   ..
Alig confidence 


...................................

























..











..
Template Conservation 

 ...................................         

     






   ..
    
     

 
Template Sequence  IKT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YYVEKGFERIVAGCPVPIVIAGGKKL. . PEREALEMCWQAID
Template Known Secondary structure  ...................................


TTTT
SS


S

..
Template Predicted Secondary structure  ...................................













..
Template SS confidence 















































































   202.. .....210.........220.........230 .........240....
 
   168.170......
Predicted Secondary structure 



Query SS confidence 








Query Sequence  RDAPIIMAG
Query Conservation 
    

 
Alig confidence 








Template Conservation 


 




Template Sequence  QGASGVDMG
Template Known Secondary structure  TT

S
Template Predicted Secondary structure 




Template SS confidence 








   245....250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions