Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence60.20%DateThu Jan 5 12:10:53 GMT 2012
Rank317Aligned Residues188
% Identity12%Templatec3fs2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.. .......110.........120 ..
Predicted Secondary structure 




















....



......
Query SS confidence 

















































. . . .

















. . . . . .

Query Sequence  PVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD. . . . MPRMEKIMAAAGPLAVTF. . . . . . HR
Query Conservation 

 





 


 

  
   
  

      



 


 
  

 

....      

  
    


......

Alig confidence 







......



































....

















......

Template Conservation 
  




......
   
 
 
   
   
  

   
    
        
 
  
  
 
     

   

  
  
Template Sequence  PLALIAGP. . . . . . CQMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANIGLEKALEVFSDLKKEYGFPVLTDIHTEE
Template Known Secondary structure 


......SB


T


B











S
Template Predicted Secondary structure 
......






















Template SS confidence 















































































   20....... ..30.........40.........50.........60.........70.........80.........90...
 
   123...... 130.........140.........150.........160.........170......... 180
Predicted Secondary structure 



.............

















.........
Query SS confidence 






. . . . . . . . . . . . .

















































. . . . . . . . .
Query Sequence  AFDMCAN. . . . . . . . . . . . . PLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGV. . . . . . . . . R
Query Conservation 


   
.............   

  

 

  





    
  
   
  
   
    

 



......... 
Alig confidence 






.............

















































.........
Template Conservation      
   

  



    
  

   
  



 

 
      
   


 
   

  
 
  

  

      
Template Sequence  QCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSD
Template Known Secondary structure  TTT
S
GGGTT
TTS

TT

GGGTTT





SSS


Template Predicted Secondary structure 





























Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   181........190..... .. ..200.........210.........220...... ...230.........240.....
Predicted Secondary structure 



.....




























..........


Query SS confidence 














. . . .

.




























. . . . . . . . . .


















Query Sequence  AENLHHFLDAGVLEV. . . . HS. SAGAWQASPMRYRNQGLSMSSDEHADEYS. . . . . . . . . . RYIVDGAAVAEMKGIIERH
Query Conservation    

  
  

    ....
 .
      
        
         
  ..........   

   
      
   
Alig confidence 














....

.




























..........


















Template Conservation 
  
  
     

  
 


 
  
    
  
  



 

 
  

 
   
 

 
   

 
 

  

  

 
Template Sequence  MRALPIMAGLGAPVIFDATHSVQQPGQREFVETLARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKLMAF
Template Known Secondary structure  TTTTTS
T




GGG

SSSGGG
SSSGGG
GGG
Template Predicted Secondary structure 

































Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   246
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  D
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   271
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions