Job Description P67826 Confidence 42.09% Date Thu Jan 5 12:10:53 GMT 2012 Rank 406 Aligned Residues 221 % Identity 14% Template c3eegB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii Resolution 2.78 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G
Query Conservation
Alig confidence																.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	L	D	E	L	G	V	D	V	I	E	A	.	.	G	F	P	V	S	S	P	G	D	F	N	S	V	V	E	I	T	K	A	V	T	R	P	T	I	C	A	L	T	R	A	K	E	A	D	.	.	.	.	.	.	.	.	.	.	I	N	I	A	G	E	A	L	R	F	A	K	R	S	R	I	H	T	G
Template Known Secondary structure							T	T	T		S					.	.			T	T	T													T	T			S	S								S					.	.	.	.	.	.	.	.	.	.									T	T		S	S
Template Predicted Secondary structure																.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.											.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.										.	.																					.	.	.												.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.										.	.																					.	.	.												.	.
Query Sequence		V	L	D	V	D	G	N	V	D	M	P	R	.	.	.	.	.	.	.	.	.	.	M	E	K	I	M	A	A	A	G	.	.	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	.	.	.	N	N	L	A	E	L	G	I	A	R	V	.	.	L	T	S	G	Q	K	S	D	A	L	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.										.	.																					.	.	.												.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.										.	.																					.	.	.												.	.
Template Conservation
Template Sequence		I	G	S	S	D	I	H	I	E	H	K	L	R	S	T	R	E	N	I	L	E	X	A	V	A	A	V	K	Q	A	K	K	V	V	H	E	V	E	F	F	C	E	D	A	G	R	A	D	Q	A	F	L	A	R	X	V	E	A	V	I	E	A	G	A	D	V	V	N	I	P	D	T	T	G	Y	X	L	P	W	Q
Template Known Secondary structure					S							T	S	T	T			T	T	T	T														S	S								S	T	T	T	S														T	T	T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.					.	.	.	.	.	.																																																					.
Query SS confidence																		.					.	.	.	.	.	.																																																					.
Query Sequence		G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	.	I	M	A	G	.	.	.	.	.	.	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q	G	L	S	M	S	S	D	E	H	A	D	E	Y	S	R	Y	.
Query Conservation																		.					.	.	.	.	.	.																																																					.
Alig confidence																		.					.	.	.	.	.	.																																																					.
Template Conservation
Template Sequence		Y	G	E	R	I	K	Y	L	X	D	N	V	S	N	I	D	K	A	I	L	S	A	H	C	H	N	D	L	G	L	A	T	A	N	S	L	A	A	L	Q	N	G	A	R	Q	V	E	C	T	I	N	G	I	G	E	R	A	G	N	T	A	L	E	E	V	V	X	A	X	E	C	H	K	E	T	L	G	L	E	T
Template Known Secondary structure														T	T	G	G	G	S							B		S	S	S											T	T	T							B	G	G	G			S	T	T		B		B										T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	D	G	A	A	V	A	E	M	K	G	I	I	E	R	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	H	K	K	L	V	P	I	S	H	L	V	S	T	L	X
Template Known Secondary structure		S			G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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