Job Description P67826 Confidence 29.29% Date Thu Jan 5 12:10:53 GMT 2012 Rank 498 Aligned Residues 89 % Identity 11% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	.	I	M	A	G	A	G	V	R
Query Conservation																																																																									.
Alig confidence																						.	.	.	.																													.																			.
Template Conservation																						.	.	.	.																													.
Template Sequence		E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	.	.	.	.	T	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	V	W	X	P	D	.	G	D	G	V	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	I	V	I	T	G	H	G	S
Template Known Secondary structure																T	T					.	.	.	.			S	S											S			S						S			T	T	.			T	T	T										T	T									S	S
Template Predicted Secondary structure																						.	.	.	.																													.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	L	H	H	F	L	D	A	G	V	L	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	T	A	V	K	A	I	K	K	G	A	Y	E	F
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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