Job Description P67826 Confidence 31.90% Date Thu Jan 5 12:10:53 GMT 2012 Rank 482 Aligned Residues 151 % Identity 17% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		67	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																																									.	.	.	.	.	.
Query SS confidence							.																																																									.	.	.	.	.	.
Query Sequence		Y	S	D	G	E	.	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	.	.	.	.	.	.	A	N	P	L	Y	T	L	N	N	L	A	E
Query Conservation							.																																																									.	.	.	.	.	.
Alig confidence							.																									.																																.	.	.	.	.	.
Template Conservation																																.
Template Sequence		T	L	F	E	E	F	Y	E	N	F	R	E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	F	.	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E
Template Known Secondary structure		B																				T		S								.																		S	S	S										T	T	S			T	T	S												T
Template Predicted Secondary structure																																.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																			.									.	.	.	.	.	.
Query SS confidence																																			.									.	.	.	.	.	.
Query Sequence		L	G	I	A	R	V	L	T	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	.	I	M	A	G	A	G	V	R	.	.	.	.	.	.	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q
Query Conservation																																			.									.	.	.	.	.	.
Alig confidence												.																							.									.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	I	D	A	L	G	I	N	C	.	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	N	I	F	G	G	C	C	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S		S						S	.	S	S														T	T			S																			T	T						T	T	T		S						T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	M	S	S	D	E	H	A	D	E	Y	S	R	Y	I	V	D	G	A	A	V	A	E	M	K	G	I	I	E	R	H	Q	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	P	E	H	V	K	L	F	R	K	V	L	G	N	R	K	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions