Job Description P67826 Confidence 71.26% Date Thu Jan 5 12:10:53 GMT 2012 Rank 267 Aligned Residues 213 % Identity 17% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	.	.	.	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G
Query Conservation																																							.	.	.	.
Alig confidence																.	.	.	.	.	.																		.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	L	D	E	F	G	I	E	Y	I	E	V	.	.	.	.	.	.	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	A	K	V	A	V	E	T	G	V	Q	G
Template Known Secondary structure									T		S					.	.	.	.	.	.			G	G	G														S			S	S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure																.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.															.	.	.	80	.	.	.	.	.	.	.	.	.	90
		90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																								.	.																									.	.
Query SS confidence												.	.	.	.	.	.	.																								.	.																									.	.
Query Sequence		L	V	T	G	V	L	D	V	D	G	.	.	.	.	.	.	.	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	.	.	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	.	.	T	S	G	Q	K	S	D	A	L	Q	G	L
Query Conservation												.	.	.	.	.	.	.																								.	.																									.	.
Alig confidence												.	.	.	.	.	.	.																								.	.																									.	.
Template Conservation
Template Sequence		I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y
Template Known Secondary structure								S																									T	T	S							S	S	T	T	T	S													G	G	G		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	.	.	.	.	.	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q	G	L	S	M	S	S	D	E	H	A	D	E	Y	S	R	Y	I	V	D	G	A
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.
Template Conservation
Template Sequence		A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V	D	T	T	I	L	G	I	G	E	R	N	G	I	T	P	L	G	G	F	L	A	R	M	Y	T	L	Q	P	E	Y	V	R	R	K	Y	K	L	E
Template Known Secondary structure												T	T	T	S							B		T	T	S												T	T							B	G	G	G		S	S	T	T		B		B																				S		G	G
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	E	M	K	G	I	I	E	R	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	P	E	L	D	R	M	V	A	R	M	V
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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