Job Description P67826 Confidence 42.30% Date Thu Jan 5 12:10:53 GMT 2012 Rank 403 Aligned Residues 214 % Identity 14% Template c2yr1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426 Resolution 2.00 Å

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		6	.	.									.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.																																											.	.	.	.	.
Query Sequence		I	C	C	.	.	.	.	.	.	.	.	Y	S	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	.	.	.	.	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F
Query Conservation					.	.	.	.	.	.	.	.																																											.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																											.	.															.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		I	C	A	P	V	V	G	E	D	D	R	K	V	L	R	E	A	E	E	V	C	R	K	Q	P	D	L	L	E	W	R	A	D	F	F	R	A	.	.	I	D	D	Q	E	R	V	L	A	T	A	N	G	L	R	N	I	A	G	E	I	P	I	L	F	T	I	R	S	E	R	E	G	G	Q	P	I	P	L	N	E
Template Known Secondary structure									S	S														S			S						G	G	G		T	T	.	.	T	T																	T	T	S									G	G	G	T					S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																																											.	.	.
Query SS confidence																.																																											.	.	.
Query Sequence		A	A	I	L	E	D	V	R	T	V	R	E	L	G	.	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	.	.	.	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S
Query Conservation																.																																											.	.	.
Alig confidence																.													.	.	.																												.	.	.
Template Conservation																													.	.	.
Template Sequence		A	E	V	R	R	L	I	E	A	I	C	R	S	G	A	I	D	L	V	D	Y	E	L	A	Y	G	E	.	.	.	R	I	A	D	V	R	R	M	T	E	E	C	S	V	W	L	V	V	S	R	H	Y	F	D	G	T	P	R	K	E	T	L	L	A	D	M	R	Q	A	E	R	Y	G	A	D	I	A	K	V	A
Template Known Secondary structure													T	T	T			S						G	G	G	G	G	.	.	.	G												T										S	S																		T	T		S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																						.	.	.																						.
Query SS confidence																						.	.	.																						.
Query Sequence		G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	.	.	.	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	.	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q	G	L	S	M	S	S	D	E	H	A	D	E
Query Conservation																						.	.	.																						.
Alig confidence																						.	.	.																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		V	M	P	K	S	P	E	D	V	L	V	L	L	Q	A	T	E	E	A	R	R	E	L	A	I	P	L	I	T	M	A	M	G	G	L	G	A	I	T	R	L	A	G	W	L	F	G	S	A	V	T	F	A	V	G	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	A	P	G	Q	.	.
Template Known Secondary structure					S	S																			S	S								T	T	T	T							G	G	G	G	T	B							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T		.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	R	Y	I	V	D	G	A	A	V	A	E	M	K	G	I	I	E	R	H	Q
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	I	P	I	D	D	V	R	T	V	L	S	I	L	Q	T	Y	S
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions