Job Description P67826 Confidence 31.04% Date Thu Jan 5 12:10:53 GMT 2012 Rank 492 Aligned Residues 115 % Identity 21% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		L	E	I	C	C	Y	S	M	E	C	A	L	T	A	Q	.	.	.	.	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.													.	.	.	.	.	.	.	.	.	.															.										.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.															.										.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	P	I	Q	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	.	.	.	.	.	.	.	.	.	.	S	N	G	A	Y	L	K	S	R	L	S	V	P	V	.	I	L	I	K	P	S	G	Y	D	.	.	.	.	.	.	.	.	.	.	V	L	Q	F	L
Template Known Secondary structure																					T	T				S							.	.	.	.	.	.	.	.	.	.								T	T		S	S			.										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.															.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.											70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.											.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L
Query Conservation
Alig confidence																	.	.																		.	.	.	.	.
Template Conservation																	.	.																		.	.	.	.	.
Template Sequence		A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	.	.	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R	.	.	.	.	.	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V
Template Known Secondary structure				T	T		T	T	S								.	.	S	S													T			.	.	.	.	.							S	S														T	T
Template Predicted Secondary structure																	.	.																		.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions