Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence55.65%DateThu Jan 5 12:10:53 GMT 2012
Rank344Aligned Residues89
% Identity13%Templatec2pcqA_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthase; PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100 .........110.... .....120.........130.
Predicted Secondary structure 

















.


.







Query SS confidence 














































.













.
















Query Sequence  VHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGN. VDMPRMEKIMAAAG. PLAVTFHRAFDMCANPL
Query Conservation 
 





 


 

  
   
  

      



 


 
  

 .

      

  
 .   







   
  
Alig confidence 

























....
















.













.
















Template Conservation 
 
  


  

 

   
      
....  

 

 
 




   

  

  

       


 

   

   
Template Sequence  LPPIPTPFDREGRLDEEAFRELAQAL. . . . EPLVDGLLVYGSNGEGVHLTPEERARGLRALRPRKPFLVGLXEETLPQAE
Template Known Secondary structure 



B
TT

B
....GGGSS

T
TTTTGGGS
T


SS



SS
Template Predicted Secondary structure 













....



















Template SS confidence 















































































   3......10.........20........ .30.........40.........50.........60.........70........
 
   132.......140......
Predicted Secondary structure 



Query SS confidence 














Query Sequence  YTLNNLAELGIARVL
Query Conservation   

  

 

  


Alig confidence 














Template Conservation    
  
   
     
Template Sequence  GALLEAKAAGAXALL
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



Template SS confidence 














   7980.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions