|   |
6 | . | . | . | 10 | . | . | . | . | . | . | |
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | C | C | Y | S | M | E | C | A | L | T | . |
. |
. |
A | Q | Q | N | G | A | D | R | V | E | L | C | A | A | P | K | E | G | G | L | T | P | S | L | G | V | L | K | S | V | R | Q | R | V | . |
T | I | P | V | H | P | I | I | R | P | R | . |
. |
G | G | D | F | C | Y | S | D | G | E | F | A | A | I | L | E | D | V |
Query Conservation |   |
|
|
|   |
|   |   |   |
|   |   | . | . | . |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   | . |   |
|
|
|   |
|
|
|
|
|
| . | . |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
V | X | P | R | H | F | D | E | A | Q | A | I | D | I | S | K | Y | E | D | V | N | L | I | E | W | R | A | D | F | L | P | K | . |
. |
D | E | I | V | A | V | A | P | A | I | F | E | K | F | A | G | K | E | I | I | F | T | L | R | T | V | Q | E | G | G | N | I | T | L | S | S | Q | E | Y | V | D | I | I | K | E | I |
Template Known Secondary structure |   |
 |
|
| S | S |  |  |  |  |  | T |
|
| G | G | G | G | T | T |
| S |  |  |  |  |  | G | G | G | S |
| G | . | . | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
| B | G | G | G | T |
| S | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | V | R | E | L | G | F | P | G | L | V | T | G | V | L | D | V | D | G | N | V | D | M | P | R | M | E | K | I | M | A | A | A | G | P | L | A | V | T | F | H | R | A | F | D | M | C | A | N | . |
P | L | Y | T | L | N | N | L | A | E | L | G | I | A | R | V | L | T | S | G | Q | K | S | D | A | L | Q | G | L |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
| . |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
| . | . |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . | . |   |   |
| . | . | . | . | . |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|
|   |
|   |
| . |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
N | A | I | Y | . |
. |
N | P | D | . |
. |
. |
. |
. |
Y | I | D | F | E | Y | F | T | H | K | S | V | F | Q | E | X | L | D | F | P | N | . |
L | I | L | S | Y | H | . |
N | F | E | E | T | P | E | N | L | X | E | A | F | S | E | X | T | K | L | A | P | R | V | V | K | I | A | V | X | P | Q | S | E | Q | D | V | L |
Template Known Secondary structure |   |
 |  |  |  | . | . |
|
| S | . | . | . | . | . |  |  |  |  |  | T | T | T | T | G | G | G | G | G | G | G | T | T |
| S | S | . |  |  |  |  |  |  | . |  | S | S |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
| . | . |
|
|
| . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | |
|
. | 90 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
. | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
159 | 160 | . | . | . | . | . | . | |
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | I | M | E | L | I | A | . |
. |
. |
. |
H | R | D | A | P | I | I | M | A | G | A | G |
Query Conservation |   |
  |   |
|   |   |
|   |   | . | . | . | . |   |
|   |   |   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
Template Sequence |   |
D | L | X | N | Y | T | R | G | F | K | T | L | N | P | E | Q | E | F | A | T | I | S | X | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |