Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence51.41%DateThu Jan 5 12:10:53 GMT 2012
Rank368Aligned Residues86
% Identity14%Templatec2jfzB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGL
Query Conservation     
  
   








 
  





 
          


 





 


 

  
   
  

      



 
Alig confidence 



















......























.................












Template Conservation        
   


 





......


  

  

    






  .................    
        
Template Sequence  LEALDFFKPHEIELLIVACN. . . . . . TASALALEEMQKYSKIPIVGVIEP. . . . . . . . . . . . . . . . . SILAIKRQVEDKN
Template Known Secondary structure  GGGT
S

......TT
SS
SS.................


TT
Template Predicted Secondary structure 






......








.................




Template SS confidence 















































































   52.......60.........70. ........80.........90..... ....100........
 
   91........100.........110.........
Predicted Secondary structure  .










Query SS confidence  .




























Query Sequence  . VTGVLDVDGNVDMPRMEKIMAAAGPLAVT
Query Conservation  .


 
  

 

      

  
    

Alig confidence  .




























Template Conservation    





  

 
  
   
       
 
Template Sequence  APILVLGTKATIQSNAYDNALKQQGYLNIS
Template Known Secondary structure  S

TTT


Template Predicted Secondary structure 





Template SS confidence 





























   109110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions