Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence40.10%DateThu Jan 5 12:10:53 GMT 2012
Rank417Aligned Residues89
% Identity17%Templatec2jfqA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of staphylococcus aureus glutamate2 racemase in complex with d-glutamate
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGL
Query Conservation     
  
   








 
  





 
          


 





 


 

  
   
  

      



 
Alig confidence 



















......























.................











.
Template Conservation        
   
   





......


   
  

    







 ................. 
  
       .
Template Sequence  VEIARKLMEFDIKMLVIACN. . . . . . TATAVALEYLQKTLSISVIGVIEP. . . . . . . . . . . . . . . . . GARTAIMTTRNQ.
Template Known Secondary structure  TTS

S

......
SSS.................
SSS.
Template Predicted Secondary structure 






......








.................




.
Template SS confidence 















































































   54.....60.........70... ......80.........90....... ..100.........
 
   91........100.........110.........120...
Predicted Secondary structure 











Query SS confidence 
































Query Sequence  VTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRA
Query Conservation 


 
  

 

      

  
    





Alig confidence 
































Template Conservation   





  

 
  
   
        
    
Template Sequence  NVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVA
Template Known Secondary structure 
T
TT
Template Predicted Secondary structure 












Template SS confidence 
































   110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions