Job Description P67826 Confidence 77.43% Date Thu Jan 5 12:10:53 GMT 2012 Rank 234 Aligned Residues 176 % Identity 10% Template c2infB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 bacillus subtilis Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																								.
Query SS confidence																																								.	.	.	.	.	.	.	.																								.
Query Sequence		D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	.	.	.	.	.	.	.	.	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	.	P	L	Y	T	L	N	N	L	A	E
Query Conservation																																								.	.	.	.	.	.	.	.																								.
Alig confidence																																								.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		E	Q	D	V	P	Y	V	L	E	T	I	K	L	L	V	N	E	Q	L	N	V	P	L	I	G	F	S	G	A	P	F	T	L	A	S	Y	M	T	E	G	G	P	S	K	N	Y	N	K	T	K	A	F	M	Y	S	M	P	D	A	W	N	L	L	M	S	K	L	A	D	M	I	I	V	Y	V	K	A	Q	I	K
Template Known Secondary structure																			T		S	S																				S			S	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																.	.	.
Query SS confidence																.	.	.	.	.	.	.																.	.	.
Query Sequence		L	G	I	A	R	V	L	T	S	G	Q	K	S	D	.	.	.	.	.	.	.	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	.	.	.	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y
Query Conservation																.	.	.	.	.	.	.																.	.	.
Alig confidence																.	.	.	.	.	.	.																.	.	.											.
Template Conservation																																																			.
Template Sequence		A	G	A	K	A	I	Q	I	F	D	S	W	V	G	A	L	N	Q	A	D	Y	R	T	Y	I	K	P	V	M	N	R	I	F	S	E	L	A	K	E	N	V	P	L	I	M	F	G	V	G	.	A	S	H	L	A	G	D	W	H	D	L	P	L	D	V	V	G	L	D	W	R	L	G	I	D	E	A	R	S	K
Template Known Secondary structure			T		S							T	T	G	G	G	S									T													T	T		S							T	T	.		G	G	G						T	S	S		S						T	T	S								T
Template Predicted Secondary structure																																																			.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	Q	G	L	S	M	S	S	D	E	H	A	D	E	Y	S	R	Y	I	V	D	G	A	A	V	A	E	M	K	G	I	I	E	R	H	Q	A	K
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		G	I	T	K	T	V	Q	G	N	.	.	.	L	D	P	S	I	L	L	A	P	W	E	V	I	E	Q	K	T	K	E	I	L	D	Q	G	M	E	S
Template Known Secondary structure		T			S						.	.	.	B		G	G	G	G	G	S																	T	T	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions