Job Description P67826 Confidence 82.60% Date Thu Jan 5 12:10:53 GMT 2012 Rank 201 Aligned Residues 143 % Identity 18% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.						.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.						.	.	.	.	.	.
Query Sequence		A	L	L	E	I	C	C	Y	S	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	.	.	.	.	.	.	G	L	T	P	S	.	.	.	.	.	.	L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D
Query Conservation																																			.	.	.	.	.	.						.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.						.	.	.	.	.	.											.
Template Conservation																																																														.
Template Sequence		V	T	Y	A	A	L	A	P	N	L	K	G	F	E	A	A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	.	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D
Template Known Secondary structure		S								S										T	T										S										S	S																			T	.	T										T	T		B	T	T	T	B
Template Predicted Secondary structure																																																														.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	.	.	.	.	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V
Query Conservation																																															.	.	.	.
Alig confidence																					.	.																									.	.	.	.																									.
Template Conservation																					.	.																																																					.
Template Sequence		V	D	P	R	Q	V	A	W	V	A	R	E	L	Q	Q	M	G	C	Y	.	.	E	V	S	L	G	D	T	I	G	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	A	G	H	F	H	D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	.	E	G	I	A	V	F
Template Known Secondary structure																	T	T		S	.	.							S	S	S															T	T	T	S		G	G	G						B		T	T	S												.	T	T
Template Predicted Secondary structure																					.	.																																																					.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230
		146	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	S
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		231	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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