Job Description P67826 Confidence 96.84% Date Thu Jan 5 12:10:53 GMT 2012 Rank 53 Aligned Residues 170 % Identity 17% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.																	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		S	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	.	.	.	C	A	A	P	K	E	G	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	G	V	L	K	S	V	R	Q	R	V	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D
Query Conservation																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.								.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	.	.	.	.	.	.	.	T	Y	Y	N	P
Template Known Secondary structure												T	T		S									S			T	T	S														T	T																		T	T	S						.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	G
Query Conservation
Alig confidence																					.	.	.	.																																																.
Template Conservation																					.	.	.	.																																																.
Template Sequence		I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	.	.	.	.	G	F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D	.	E	M	T	Y	F	V	S	V	T
Template Known Secondary structure																	T	T			.	.	.	.					T	T																T	T									T	T														S	.	S						S	S
Template Predicted Secondary structure																					.	.	.	.																																																.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	.	.	.	.	D	K	P	V	V	V	G	F	G	V	S	K	K	E	H	A	R	E	I	G	S	F	A	D	G	V
Template Known Secondary structure																		.	.	.	.		S						S	S			S									T	T	S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions