Job Description P67826 Confidence 38.73% Date Thu Jan 5 12:10:53 GMT 2012 Rank 426 Aligned Residues 175 % Identity 18% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		I	C	C	Y	S	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	.	.	.	.	.	.	.	.	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	.	.	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A
Query Conservation																															.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		V	L	T	P	N	L	K	G	F	E	A	A	V	A	A	G	A	K	E	V	V	I	F	G	A	A	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K
Template Known Secondary structure						S										T	T		S								S									T	S	S		T	T	T															T	T									S	T	T		B	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.																																			.	.
Query SS confidence																																										.	.	.	.																																			.	.
Query Sequence		I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	.	.	.	.	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	.	.
Query Conservation																																										.	.	.	.																																			.	.
Alig confidence																	.	.																								.	.	.	.																								.											.	.
Template Conservation																	.	.																																																			.
Template Sequence		V	A	E	V	T	K	K	F	Y	S	M	G	C	Y	E	.	.	I	S	L	G	D	T	I	G	V	G	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	H	D	T	Y	G	Q	A	L	A	N	T	L	M	A	L	.	Q	M	G	V	S	V	V	D	S	S	V	A
Template Known Secondary structure												T	T		S		.	.						T	T																			S		G	G	G						B		T	T	S											.		T	T							B	T	T
Template Predicted Secondary structure																	.	.																																																			.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.
										149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		G	L	G	G	C	P	Y	A	Q	G	A	S	G	N	L	A	T	E	D	L	V	Y	M	L	E	G	L	G	.	.	.	.	.	.	I	H	T	G	V	N	L	Q	K	L	L	E	A	G	N
Template Known Secondary structure		S					T	T	S	S	S				B		B											T	T	.	.	.	.	.	.		B
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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