Job Description P67826 Confidence 47.26% Date Thu Jan 5 12:10:53 GMT 2012 Rank 387 Aligned Residues 137 % Identity 12% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	I	C	C	Y	S	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	.	.	.	.	.	.	.	.	.	.	.	.	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																												.
Template Sequence		Y	S	V	L	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	.	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T
Template Known Secondary structure							S	S										T	T		S								S									T	S	S																			T	.	T										S	S			T	T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																													.	.	.	.																.	.	.	.
Query SS confidence																																													.	.	.	.																.	.	.	.
Query Sequence		F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	.	.	.	.	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	.	.	.	.	P	L	Y	T	L	N	N	L	A	E	L	G	I	A
Query Conservation																																													.	.	.	.																.	.	.	.
Alig confidence																			.	.																									.	.	.	.								.	.	.	.	.				.	.	.	.
Template Conservation																			.	.																																				.	.	.	.	.
Template Sequence		P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	.	.	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	H	.	.	.	.	.	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R
Template Known Secondary structure																T		S	.	.							T	T	S																T	T	S		G	G	G					.	.	.	.	.		B		T	T	S													T
Template Predicted Secondary structure																			.	.																																				.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		144	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	D	A	S
Template Known Secondary structure						B
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions