Job Description P67826 Confidence 96.77% Date Thu Jan 5 12:10:53 GMT 2012 Rank 55 Aligned Residues 171 % Identity 13% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	.	.	.	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G
Query Conservation																																										.	.	.	.
Alig confidence																						.	.	.	.	.	.															.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	.	.	.	.	.	.	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	A	L	F	S	T
Template Known Secondary structure										G	G	G		S							T	.	.	.	.	.	.	T	S															T	T			G	G	G					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																		.	.	.	.	.	70	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A
Query Conservation
Alig confidence								.	.	.	.																			.							.	.	.	.	.	.	.					.																				.	.	.	.
Template Conservation								.	.	.	.																			.							.	.	.	.	.	.	.					.																				.	.	.	.
Template Sequence		I	H	R	V	Q	L	.	.	.	.	P	S	G	S	F	S	P	K	Q	I	R	A	R	F	P	H	L	H	.	I	G	R	S	V	H	.	.	.	.	.	.	.	S	L	E	E	.	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	R	.	.	.	.	G	V	S	L	L	S	D	I	K	Q
Template Known Secondary structure								.	.	.	.		T	T	S											T	T			.							.	.	.	.	.	.	.	S				.							T	T		S										.	.	.	.
Template Predicted Secondary structure								.	.	.	.																			.							.	.	.	.	.	.	.					.																				.	.	.	.
Template SS confidence
		73	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.								.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q	G	L	S	M	S	S	D	E	H	A	D	E	Y	S	R	Y	I	V	D	G	A	A	V	A	E	M	K	G	I	I	E	R	H	Q
Query Conservation
Alig confidence				.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	.	S	I	P	V	I	A	I	G	G	M	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A	E	P	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	R	Y	S	R	K	L	K	E	M	R
Template Known Secondary structure				.		S						S	S			G	G	G							T	T		S					S					T	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																									.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions