 |
Job Description | P67826 | Confidence | 32.24% | Date | Thu Jan 5 12:10:53 GMT 2012 |
Rank | 477 | Aligned Residues | 123 |
% Identity | 13% | Template | c1vhkA_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:hypothetical protein yqeu; |
PDBTitle: crystal structure of an hypothetical protein
|
Resolution | 2.60 Å |
|
 |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | I | L | E | D | V | R | T | V | R | E | L | G | F | P | G | L | V | T | G | V | L | D | V | D | G | N | V | D | M | P | R | M | E | K | I | M | . |
A | A | A | G | P | L | A | V | T | F | H | R | A | F | D | M | C | A | N | P | L | Y | T | L | N | N | L | A | E | L | G | I | A | R | V | L | T | S | G | Q | K |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|
| . |   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |   |
|   |
| . |   |   |
|   |
|
|   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Template Sequence |   |
D | K | L | E | W | I | I | Q | K | G | T | E | L | G | A | H | A | F | I | P | . |
F | Q | A | A | R | S | V | V | K | R | E | R | W | T | K | I | A | K | E | A | A | E | Q | S | Y | R | N | E | V | P | R | V | X | D | V | H | S | F | Q | Q | L | L | Q | R | X | Q | D | F | D | K | C | V | V | A | Y | . |
. |
. |
. |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | . |  |
|
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|
|  |  |
|
|
| B |
|  |  |  |  |  |  |  | G | G | G | S | S |  |  |  |  |  |
| . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
  |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | D | A | L | Q | G | L | S | K | I | M | E | L | I | A | H | R | D | A | P | I | I | M | A | G | . |
. |
A | G | V | R | A | E | N | L | H | H | F | L | D | A | G | V | L | E | V | H | S | S | A | G | A | W | Q |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |
| . | . |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
Template Sequence |   |
. |
. |
. |
E | S | A | F | S | A | I | V | S | S | L | P | K | G | S | S | L | L | I | V | F | G | P | E | G | G | L | T | E | A | E | V | E | R | L | T | E | Q | D | G | V | T | C | G | L | G | P | R | I | L | R |
Template Known Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  |  |
|
| T | T |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
|
|
| S | S |
|
|
|
Template Predicted Secondary structure |   |
. | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|