Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6J5
Confidence99.81%DateThu Jan 5 11:03:18 GMT 2012
Rank27Aligned Residues231
% Identity23%Templated1kifa1
SCOP infoNucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.... .....30.........40.........50.........60.........70....
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Query Sequence  MRVVILGSGVVGVASAWYLNQAGH. . . . . . EVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAP
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Template Sequence  MRVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADR. FTPFTTTDVAAGLWQPYTSEPSNP. . . . . . . . . . . . . . . . .
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   1........10.........20.........30........ .40.........50.........60..
 
   75....80.........90.........100.........110.........120........ .130.........140.........150...
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Query Sequence  LAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKALRAETNI. QYEGRQGGTLQLFRTEQQYENATRD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDP. . . . .
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   63......70.........80.........90.........100.....
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  IAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQ
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Template Sequence  . . YWKDMVLGFRKLTPRELDMFPD. . . . . . . . . YRYGWFNTSLILEGRKYLQWLTERLTERGVKFFLRK. . . . . . . . . . .
Template Known Secondary structure  ..TTTTTS

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   106...110.........120....... ..130.........140.........150.........160...
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  IYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGM
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Template Sequence  . VESFEEVARGGADVIINCTGVWAGVLQPDPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   164.....170.........180.........190....
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  AEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QVRLERE. . . QLRFGSSNTEVIHNYGHGGYGLTIHWGCALE
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   288.290.... .....300.........310.........320.....
 
   394.....
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Query Sequence  LSDLLS
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Template Sequence  VAKLFG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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