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Job DescriptionP0A6J5
Confidence99.66%DateThu Jan 5 11:03:18 GMT 2012
Rank44Aligned Residues394
% Identity11%Templatec3rhaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putrescine oxidase; PDBTitle: the crystal structure of oxidoreductase from arthrobacter aurescens
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........
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Query Sequence  RVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSA. . ANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRL
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Template Sequence  DVVIVGAGPSGLTAARELKKAGLSVAVLEARDRVGGRTWTDTIDGAMLEIGGQWVSPDQTVLMELLDELGLKMYSRYRDG
Template Known Secondary structure  S

STT


SSSSS
TT

TT
S


TT
T





S
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   80.........90.........100.........110.........120.........130.... .....140.........150..
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Query Sequence  DGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKALRAETNIQYEGRQ. . . . . . . GGTLQLFRTEQQYENATR
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Template Conservation                                                                   
              
Template Sequence  ESVYIGADGKRTQYTGDTFPVNETTKAEMDKLVAILDELAAEIGPTEPWAHPKARELDTISFHHWLRQNSNDEEACNNIG
Template Known Secondary structure 
TT


SSS
S


SS
GGGSTTSSB


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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  DIAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGE
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Template Sequence  LFIAGGMLTKPAHAFSALQAVLMAASAGSFSHLTDEDFILDKRVIGGMQQVSLLQAAEL. . . GDDVVLNSPVRTIKWDEN
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S
TTSSBTT

T
TT
TT...GGG
S

TT
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   169170.........180.........190.........200.........210.........220....... ..230.........240.....
 
   233......240.........250... ......260.........270.........280.........290.........300.
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Query Sequence  QIYGVKCGDEVIKADAYVMAF. . . . . . . . . . . GSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAI
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Template Conservation    . 
           

 
              
                  
                          
Template Sequence  GV. SVVSERATVNARFVIMAVPPNLYSRVSFDPPLPRRQHQMHQHQSLGLVIKVHAVYDTPFWREEGLSGTGFSAGALVQ
Template Known Secondary structure  .SSS
S
GGGGGGSS


T

SS
GGGGGT
TTSSS
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   246. ..250.........260.........270.........280.........290.........300.........310.........320....
 
   302.......310.........320.........330.........340.........350.........360........
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Query Sequence  . . . . . . . . . TRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRT. . . .
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Template Conservation                
                           
                  
       
          
Template Sequence  EVYDNTNHGDSRGTLVGFVSDEKADAVFELSAEDRKKAILESIAGFLGDKALTPEVYYESDWGSEEWTRGAYASSYDLGG
Template Known Secondary structure 


TT
SSTS

GGGG

S

GGG
TTT
SSS

TT
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   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   369370.........380... ......390.........
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Query Sequence  . . . . . . . . . . RFKNLWLNTGHGTLG. . . . WTMACGSGQLLSDLLS
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Template Sequence  LHRYGKDQHANVGPIYWSSSDLAAEGYQHVDGAVRMGQATAARIV
Template Known Secondary structure  GGGTT

BTT

GGG
STTTTS
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   405....410.........420.........430.........440.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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