Job Description P0A6J5 Confidence 99.51% Date Thu Jan 5 11:03:18 GMT 2012 Rank 60 Aligned Residues 341 % Identity 13% Template c3hdqI_ PDB info PDB header:isomerase Chain: I: PDB Molecule:udp-galactopyranose mutase; PDBTitle: crystal structure of udp-galactopyranose mutase (oxidized2 form) in complex with substrate Resolution 2.36 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		R	V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	N	A	.	.	.	.	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.
Template Conservation
Template Sequence		D	Y	L	I	V	G	A	G	F	A	G	S	V	L	A	E	R	L	A	S	S	G	Q	R	V	L	I	V	D	R	R	P	H	I	G	G	N	A	Y	D	C	Y	D	D	A	G	V	L	I	H	P	Y	G	P	H	I	F	H	T	N	S	K	D	V	F	E	Y	L	S	R	F	T	E	W	R	P	Y	Q	H	R
Template Known Secondary structure									S													T	T								S	S	S	S	S	S	G	G	G						T	T	S					T	T	S							S										T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	G	T	Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T	R	D	I	A	V	L
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		V	L	A	S	V	D	G	Q	L	L	P	I	P	I	N	L	D	T	V	N	R	L	Y	G	L	N	L	T	S	F	Q	V	E	E	F	F	A	S	V	.	.	.	.	.	.	.	.	A	E	K	V	E	Q	V	R	T	S	E	D	V	V	V	S	K	V	G	R	D	L	Y	N	K	F	F	R	G	Y	T	R	K
Template Known Secondary structure							T	T						S											T																.	.	.	.	.	.	.	.					S	S			B																		T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G	E	Q	I	Y	G	V
Query Conservation
Alig confidence																																									.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	W	G	L	D	P	S	E	L	D	A	S	V	T	A	R	V	P	T	R	T	N	R	D	N	R	Y	F	A	D	T	Y	Q	A	M	P	L	H	G	.	.	.	.	.	.	Y	T	R	M	F	Q	N	M	L	S	S	P	N	I	K	V	M	L	N	T	D	Y	R	E	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		G	G	G	S	B	T	T	T	G	G	G	S				S	S					S				S						T	T		.	.	.	.	.	.									T		S	T	T						S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.												.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	C	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G	S	Y	S	T	A	M	L	K	G	I	V	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	A	Q	E	D	G	A	P	V	S	T	I	L	D	E	T	Y	K	I	A	I	T	.	.	.	.	.	.	.	.	.	.	.	R	F	D	N
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.															.	.	.
Template Sequence		.	.	.	A	D	F	I	P	F	Q	H	M	I	Y	T	G	P	.	.	.	V	D	A	F	F	D	F	C	Y	G	K	L	P	Y	R	S	L	E	F	R	H	E	T	H	D	T	E	Q	L	L	P	T	G	T	V	N	Y	P	N	D	Y	A	Y	T	R	V	S	E	F	K	H	I	T	G	Q	R	H	H	Q	T
Template Known Secondary structure		.	.	.	T	T	T	S									S		.	.	.					T	T	T	T	T																S	S	S		S		S	S	S					S	S	S	S	S		S														S	S
Template Predicted Secondary structure		.	.	.															.	.	.
Template SS confidence
					247	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		R	I	R	V	G	G	M	A	E	I	V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	H	V	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D	G	T	P	V	V	G	R	T	R	F	K	N	L	W	L	N	T	G	H	G	T	L	.	.	.	G
Query Conservation																																																																														.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	V	Y	E	Y	P	R	A	E	G	D	P	Y	Y	P	V	P	R	P	E	N	A	E	L	Y	K	K	Y	E	A	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	D	V	T	F	V	G	R	L	A	T	Y	R	Y	Y	N
Template Known Secondary structure										S	S	S	S							S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T					S	T	T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																													.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	M	A	C	G	S	G	Q	L	L	S	D	L	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	Q	V	V	A	Q	A	L	A	T	F	R	R	L	Q	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions