Job Description P0A6J5 Confidence 99.08% Date Thu Jan 5 11:03:18 GMT 2012 Rank 134 Aligned Residues 280 % Identity 17% Template c3c4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable tryptophan hydroxylase viod; PDBTitle: crystal structure of viod hydroxylase in complex with fad2 from chromobacterium violaceum. northeast structural3 genomics consortium target cvr158 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		M	R	V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	.	.	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V	R
Query Conservation																								.	.
Alig confidence																								.	.														.	.
Template Conservation																																							.	.
Template Sequence		X	K	I	L	V	I	G	A	G	P	A	G	L	V	F	A	S	Q	L	K	Q	A	R	P	L	W	A	I	D	I	V	E	K	N	D	E	Q	.	.	E	V	L	G	W	G	V	V	L	P	G	R	P	G	Q	H	P	A	N	P	L	S	Y	L	D	A	P	E	R	L	N	P	Q	F	L	E	D	F	K	L	V
Template Known Secondary structure										S															T	T	S							S	S		T	T	.	.					S						S		T	T	T		T	T		G	G	G	G	S	S		G	G	G	G
Template Predicted Secondary structure																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	T	Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T	R	D	I	A	V	L	E
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	H	N	E	P	S	L	X	S	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G	E	Q	I	Y	G	V	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	L	C	G	V	E	R	R	G	L	V	H	A	L	R	D	K	C	R	S	Q	G	I	A	I	R	F	E	S	P	L	.	.	.	.	.	.	.	.	.	.	.	L	E	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																					T	T					T	T				.	.	.	.	.	.	.	.	.	.	.		S	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																						.	.	.																																												.	.	.
Query SS confidence																						.	.	.																																												.	.	.
Query Sequence		C	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G	S	Y	S	T	.	.	.	A	M	L	K	G	I	V	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	A	Q	E	D	G	A	P	V	S	T	I	L	D	E	T	Y	K	I	A	I	.	.	.	T	R	F	D	N	R	I	R	V	G	G
Query Conservation																						.	.	.																																												.	.	.
Alig confidence																						.	.	.																																												.	.	.
Template Conservation
Template Sequence		G	E	L	P	L	A	D	Y	D	L	V	V	L	A	N	G	V	N	H	K	T	A	H	F	T	E	A	L	V	P	Q	V	D	Y	G	R	N	K	Y	I	W	Y	G	T	S	Q	L	F	D	Q	X	N	L	V	F	R	T	H	G	K	D	I	F	I	A	H	A	Y	K	Y	S	D	T	X	S	T	F	I	V	E
Template Known Secondary structure		G	G			G	G	G		S							G	G	G	G	G	T			S	S	G	G	G																	S	S			S	S									T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.									.	380	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.
Query Sequence		M	A	E	I	V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	H	V	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D	G	T	P	V	V	G	R	T	R	F	K	N	L	W	L	N	T	G	.	.	.	.	.	.	.	.	H	G	T	L	G	W
Query Conservation																																																																				.	.	.	.	.	.	.	.
Alig confidence																																																						.	.													.	.	.	.	.	.	.	.
Template Conservation																																																						.	.
Template Sequence		C	S	E	E	T	Y	A	R	A	R	L	G	E	X	S	E	E	A	S	A	E	Y	V	A	K	V	F	Q	A	E	L	G	G	H	G	L	V	S	Q	P	G	L	G	W	R	N	F	X	T	L	S	H	.	.	D	R	C	H	D	G	K	L	V	L	L	G	D	A	L	Q	S	G	H	F	S	I	G	H	G	T
Template Known Secondary structure										T	T	S	S	S	S													T					T	T				B			T	T	T		S									.	.	S		S			T	T					G	G	G	T					G	G	G
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	A	C	G	S	G	Q	L	L	S	D	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	X	A	V	V	V	A	Q	L	L	V	K	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions