Job Description P0A6J5 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 11 Aligned Residues 354 % Identity 16% Template c2uzzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:n-methyl-l-tryptophan oxidase; PDBTitle: x-ray structure of n-methyl-l-tryptophan oxidase (mtox) Resolution 3.2 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	.	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V	R	L	D	G
Query Conservation																																			.
Alig confidence																																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	G	L	N	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	T	R	L	I	R	H	A	Y	G	E	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S		T	T													T	T								S	S		S	S	S	S	S	S	S	S		S	S						S	S		S	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T	R	D	I	A	V	L	E	D	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	P	L	V	L	R	A	Q	M	L	W	D	E	L	S	R	H	N	E	D	D	P	I	F	V	R	S	G	V	I	N	L	G	P	A	D	S	.	.	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G																T	T		S	S	S		S												T	T		.	.													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template SS confidence
																												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G	E	Q	I	Y	G	V	K	C	G	D
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	.	.	G	L	F	E	T	D	S	G	F	L	R	S	E	L	A	I	K	T	W	I	Q	L	A	K	E	A	G	C	A	Q	L	F	N	C	P	V	T	A	I	R	H	D	D	D	G	V	T	I	E	T	A	D	G
Template Known Secondary structure																S	T	T					T	T			.	.					S	S																				T	T						S										S	S							S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		E	V	I	K	A	D	A	Y	V	M	A	F	G	S	Y	S	T	A	M	L	K	G	I	V	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	A	Q	E	D	G	A	P	.	.	.	.	.	.	V	S	T	I	L	D	E	T	Y	K	I	A	I	T	R	F	D	N	R	I	R	V	G	G	M	A	E
Query Conservation																																																	.	.	.	.	.	.
Alig confidence		.																								.	.	.																					.	.	.	.	.	.
Template Conservation		.																								.	.	.
Template Sequence		.	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	E	L	P	.	.	.	V	Q	P	V	R	K	V	F	A	W	Y	Q	A	D	G	R	Y	S	V	K	N	K	F	P	A	F	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G
Template Known Secondary structure		.												G	G	G	G	G	G	T	S	T	T	S		.	.	.															G	G	G	S	T	T	T	T									T	T	S									S	S	S							S	S
Template Predicted Secondary structure		.																								.	.	.
Template SS confidence
			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.						.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																									.
Query SS confidence																																.	.	.	.	.																									.
Query Sequence		I	V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	H	V	.	.	.	.	.	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D	G	T	P	V	V	G	R	T	R	.	F	K	N	L	W	L	N	T	G	H	G	T	L	G	W	T	M	A	C	G
Query Conservation																																.	.	.	.	.																									.
Alig confidence																																.	.	.	.	.																									.
Template Conservation
Template Sequence		G	Q	V	I	H	S	A	D	E	R	V	P	F	A	E	V	V	S	D	G	S	E	A	F	P	F	L	R	N	V	L	P	G	I	G	C	C	L	Y	G	A	A	C	T	Y	D	N	S	P	D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	V
Template Known Secondary structure							S	G	G	G	S			G	G	G	S	T	T	T	T	T	S	S							T	S		S			S													T	T	S	S							T	T		T	T									S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Q	L	L	S	D	L	L	S	G	R	T	P	A	I	P	Y	E	D	L	S	V	A	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	E	I	A	A	D	F	A	Q	D	K	K	S	D	F	D	L	T	P	F	R	L	S	R	F
Template Known Secondary structure											T	T				S	S			G	G	G		S	T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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