Job Description P0A6J5 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 15 Aligned Residues 339 % Identity 18% Template c2rgoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V	R	L	D	G	T
Query Conservation
Alig confidence																																.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	I	I	G	G	G	I	T	G	A	G	V	A	V	Q	A	A	A	S	G	I	K	T	G	L	I	E	M	Q	.	D	F	A	E	G	T	S	S	R	S	T	K	L	V	H	G	G	I	R	Y	L	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S												T	T	T								S	S	.	S	T	T		S	G	G	G	S	S		S						G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	.	.	.	.	.	.	.	.	.	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T	R	D
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	V	E	V	V	A	D	T	V	G	E	R	A	V	V	Q	G	I	A	P	H	I	P	K	P	D	P	M	L	L	P	I	Y	E	D	E	G	A	T	T	F	N	M	F	S	V	K	V	A	M	D	L	Y	D	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																				T	T	S	S											S	S	S	S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	L	E	D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G	E	Q
Query Conservation
Alig confidence																																.	.	.
Template Conservation																																.	.	.
Template Sequence		L	A	N	V	T	G	T	K	Y	E	N	Y	T	L	T	P	E	E	V	L	E	R	E	P	F	L	K	K	E	G	.	.	.	L	K	G	A	G	V	Y	L	D	F	R	N	N	D	A	R	L	V	I	D	N	I	K	K	A	A	E	D	G	A	Y	L	V	S	K	M	K	A	V	G	F	L	Y	E	G	D	Q
Template Known Secondary structure			T	T		T	T	S	T	T															T	T	S			T	T	.	.	.																												T	T						S									S	S	S	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		234	.	.	.							.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300
Predicted Secondary structure						.	.	.	.	.	.																													.	.	.	.																													.	.	.
Query SS confidence						.	.	.	.	.	.																													.	.	.	.																													.	.	.
Query Sequence		I	Y	G	V	.	.	.	.	.	.	K	C	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G	S	Y	S	T	A	M	L	K	G	I	V	.	.	.	.	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	A	Q	E	D	G	A	P	V	S	T	I	L	.	.	.	D	E	T	Y	K	I	A
Query Conservation						.	.	.	.	.	.																													.	.	.	.																													.	.	.
Alig confidence						.	.	.	.	.	.																													.	.	.	.																													.	.	.
Template Conservation
Template Sequence		I	V	G	V	K	A	R	D	L	L	T	D	E	V	I	E	I	K	A	K	L	V	I	N	T	S	G	P	W	V	D	K	V	R	N	L	N	F	T	R	P	V	S	P	K	M	R	P	T	K	G	I	H	L	V	V	D	A	K	K	L	P	V	P	Q	P	T	Y	F	D	T	G	K	Q	D	G	R	M	V	F
Template Known Secondary structure										T	T	T	T															G	G	G						T	T		T	T	S						B												G	G	G	S			S	S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																														.	.																											.	.	.	.	.	.
Query SS confidence																.	.	.																														.	.																											.	.	.	.	.	.
Query Sequence		I	T	R	F	D	N	R	I	R	V	G	G	M	A	.	.	.	E	I	V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	.	.	H	V	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D	G	T	P	V	V	G	R	T	R	.	.	.	.	.	.
Query Conservation																.	.	.																														.	.																											.	.	.	.	.	.
Alig confidence																.	.	.																														.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	P	R	E	N	K	T	Y	F	G	T	T	D	T	D	Y	Q	G	D	F	T	D	P	K	V	T	Q	E	D	V	D	Y	L	L	D	V	I	N	H	R	Y	P	E	A	N	I	T	L	A	D	I	E	A	S	W	A	G	L	R	P	L	L	I	G	N	S	G	S	D	Y	N	G	G	T	I	S	R	G	S
Template Known Secondary structure						T	T													S		S	S	S																			S	T	T	S				G	G	G												B	T	T			G	G	G	G	T	T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	F	K	N	L	W	L	N	T	G	H	G	T	L	G	W	T	M	A	C	G	S	G	Q	L	L	S	D	L	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.											.	.	.
Template Conservation																	.	.	.
Template Sequence		S	L	E	R	E	P	D	G	L	L	T	L	S	G	G	.	.	.	K	I	T	D	Y	R	K	M	A	E	G	A	L	R	L	I
Template Known Secondary structure							T	T	S								.	.	.		G	G	G
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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