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Job DescriptionP0A6J5
Confidence99.97%DateThu Jan 5 11:03:18 GMT 2012
Rank18Aligned Residues336
% Identity17%Templatec2rghA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGT
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Template Sequence  LLIIGGGITGAGVAVQAAASGIKTGLIEXQ. DFAEGTSSRSTKLVHGGIRYLKT. . . . . . . . . . . . . . . . . . . . . . . . . .
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STT


SS.STT
SGGGSS
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   21........30.........40.........50 .........60.........70...
 
   83......90.........100.........110.........120....... ..130.........140.........150...
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Query Sequence  QFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKALRAETN. . . . . . . . . IQYEGRQGGTLQLFRTEQQYENATRD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . FDVEVVADTVGERAVVQGIAPHIPKPDPXLLPIYEDEGATTFNXFSVKVAXDLYDK
Template Known Secondary structure  ........................T

TTSS

SSSSS
S

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   74.....80.........90.........100.........110.........120.........
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  IAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQ
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Template Sequence  LANVTGTKYENYTLTPEEVLEREPFLK. . . KEGLKGAGVYLDFRNNDARLVIDNIKKAAEDGAYLVSKXKAVGFLYEGDQ
Template Known Secondary structure  T
SSSTT



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   130.........140.........150...... ...160.........170.........180.........190.........200......
 
   234..... 240.........250.........260..... ....270.........280.........290.. .......300
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Query Sequence  IYGVKC. . . . . . GDEVIKADAYVMAFGSYSTAMLKGIV. . . . DIPVYPLKGYSLTIPIAQEDGAPVSTI. . . LDETYKIA
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Template Sequence  IVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSPKXRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRXVF
Template Known Secondary structure  TTT

BS


GGGTT

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B

GGGS

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   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   301........310... ......320.........330.........340. ........350.........360.........370.....
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Query Sequence  ITRFDNRIRVGGM. . . AEIVGFNTELLQPRRETLEMVVRDLYPR. . GGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWL
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Template Sequence  AIPRENKTYFGTTDTDYQGDFTDPKVTQEDVDYLLDVINHRYPEANITLADIEASWAGLRPLLIGSSLEREP. . . DGLLT
Template Known Secondary structure  TT





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   287..290.........300.........310.........320.........330.........340.........350........ .360...
 
   376...380.........390........
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Query Sequence  NTGHGTLGWTMACGSGQLLSDLL
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Template Sequence  LSGGK. . . ITDYRKXAEGALRLI
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   425.... 430.........440....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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