Job Description P0A6J5 Confidence 98.90% Date Thu Jan 5 11:03:18 GMT 2012 Rank 178 Aligned Residues 252 % Identity 14% Template c2cfyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of human thioredoxin reductase 1 Resolution 2.7 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V	R	L	D	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	I	I	G	G	G	S	G	G	L	A	A	A	K	E	A	A	Q	Y	G	K	K	V	M	V	L	D	F	V	T	P	T	P	L	G	T	R	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	A	L	L	G	Q	A	L	Q	D	S	R	N	Y	G	W	K	V	E	E	T	V
Template Known Secondary structure								S												T	T	T													T	T						T	T							S																							T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																		.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	T	E	Q
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	D	W	D	R	M	I	E	A	V	Q	N	H	I	G	S	L	N	W	G	Y	R	V	A	L	R	E	K	K	V	V	Y	E	N	A	Y	G	Q	F	I	G	P	H	R	I	K	A	T	N	N	K	G	K	E	K	I	Y	S	A	E	R	F	L	I	A	T	G	E	R	P	R	Y	L	G	I	P	G	D	K
Template Known Secondary structure																														T	T													T	T							T	T	S																						S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	E	N	A	T	R	D	I	A	V	L	E	D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	C	I	S	S	D	D	L	F	S	L	P	Y	C	P	G	K	T	L	V	V	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	G	I	G	L	D	V	T	V	M	V	R	S	I	L	L	R	G	F	D	Q	D	M	A	N	K	I	G	E	H	M	E	E	H	G	I	K	F	I	R	Q	F	V	P	I
Template Known Secondary structure					B						T	T		S	S				S							S													T	T								S	S		S	S	T	T	S															T	T						S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.										.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	C	D	G	E	Q	I	Y	G	V	K	.	.	.	.	.	.	.	.	.	C	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	E	Q	I	E	A	G	T	P	G	R	L	R	V	V	A	Q	S	T	N	S	E	E	I	I	E	G	E	Y	N	T	V	M	L	A	I	G
Template Known Secondary structure									S	T	T										S	S	S	S								S						S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions