Job Description P0A6J5 Confidence 99.23% Date Thu Jan 5 11:03:18 GMT 2012 Rank 96 Aligned Residues 252 % Identity 16% Template c1zkqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase 2, mitochondrial; PDBTitle: crystal structure of mouse thioredoxin reductase type 2 Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V	R	L	D	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	I	G	G	G	S	G	G	L	A	C	A	K	E	A	A	Q	L	G	K	K	V	A	V	A	D	Y	V	E	P	S	P	R	G	T	K	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	A	L	L	G	G	M	I	R	D	A	H	H	Y	G	W	E	V	A	Q	P	V
Template Known Secondary structure								S													T	T													T	T						S	S							S																							T	T					S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																			.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	H	N	W	K	T	M	A	E	A	V	Q	N	H	V	K	S	L	N	W	G	H	R	V	Q	L	Q	D	R	K	V	K	Y	F	N	I	K	A	S	F	V	D	E	H	T	V	R	G	V	D	K	G	G	K	A	T	L	L	S	A	E	H	I	V	I	A	T	G	G	R	P	R	Y	P	T	Q	V	K	G	A
Template Known Secondary structure																														T	T							B			B	S	S	S	S					B		T	T																							T	T		B	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Y	E	N	A	T	R	D	I	A	V	L	E	D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	Y	G	I	T	S	D	D	I	F	W	L	K	E	S	P	G	K	T	L	V	V	G	A	S	Y	V	A	L	E	C	A	G	F	L	T	G	I	G	L	D	T	T	V	M	M	R	S	I	P	L	R	G	F	D	Q	Q	M	S	S	L	V	T	E	H	M	E	S	H	G	T	Q	F	L	K	G	C	V	P
Template Known Secondary structure						B						T	T		S	S				S							S													T	T								S	S		S	S	T	T	S														T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		D	Q	L	L	C	D	G	E	Q	I	Y	G	V	K	C	.	.	.	.	.	.	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	I	K	K	L	P	T	N	Q	L	Q	V	T	W	E	D	H	A	S	G	K	E	D	T	G	T	F	D	T	V	L	W	A	I	G
Template Known Secondary structure								T	T	S									T	T	S	S	S							S						S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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