Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6J5
Confidence99.74%DateThu Jan 5 11:03:18 GMT 2012
Rank36Aligned Residues428
% Identity11%Templatec1s3bB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:amine oxidase [flavin-containing] b; PDBTitle: crystal structure of maob in complex with n-methyl-n-2 propargyl-1(r)-aminoindan
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.. .......50.........60.........70.......
Predicted Secondary structure 


















...



















Query SS confidence 









































. . .


































Query Sequence  MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAA. . . NAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAV
Query Conservation 
 







 


 
  

  
  
 


     

 

  ...  
                                
Alig confidence 









































...


































Template Conservation   














  
   
  
 


     


  
     
   
 
             
   


       
Template Sequence  CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNE
Template Known Secondary structure 
S

BTT


SSSSSBTT

TTTSS


TT
TT




Template Predicted Secondary structure 































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   78.80.........90.........100.........110.........120.. .......130.........140.........150...
Predicted Secondary structure 




....













Query SS confidence 












































. . . .






























Query Sequence  RLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKAL. . . . RAETNIQYEGRQGGTLQLFRTEQQYENATRD
Query Conservation                                               ....                               
Alig confidence 












































....






























Template Conservation           
                                                         
            
Template Sequence  VERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQL
Template Known Secondary structure  SSTT
SSS



STTS
TT
GGGSTTTSB
SS
Template Predicted Secondary structure 

























Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQ
Query Conservation                                                       
       
        
  
      
Alig confidence 















































































Template Conservation                                                      
                 
         
Template Sequence  ATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTREN
Template Known Secondary structure  SS
TTTSBTTT

STTSTTSTT
TGGGSS


SSSS
Template Predicted Secondary structure 





























Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   234.....240.........250....... ..260.........270.........280.........290......
Predicted Secondary structure 

















...........














......
Query SS confidence 























. . . . . . . . . . .






































. . . . . .
Query Sequence  IYGVKCGDEVIKADAYVMAFGSYS. . . . . . . . . . . TAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDET. . . . . .
Query Conservation                  
 
     ...........  
                                    ......
Alig confidence 























...........






































......
Template Conservation    
    
     
 

 
 
      
     

      
          
                           
Template Sequence  VLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPV
Template Known Secondary structure  TTS
S
S
GGGGGGSS


TTS

B


SS
GGGGGT
SSS
S
Template Predicted Secondary structure 










































Template SS confidence 















































































   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   297..300....... ..310.........320.........330.........340.........350.........360........
Predicted Secondary structure 




.....






























...
Query SS confidence 










. . . . .




























































. . .
Query Sequence  YKIAITRFDNR. . . . . IRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRT. . .
Query Conservation             .....            
          
        
 
          
 
  
 
  



  ...
Alig confidence 










.....




























































...
Template Conservation                                    
        
                   
   
   
        
Template Sequence  AYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPP
Template Known Secondary structure  S


TTS
S
TTTS
T
GGGG

SGGG
TTT
SSS
B


T
Template Predicted Secondary structure 







































Template SS confidence 















































































   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   369370.........380... ......390.........400.........410.........420........
Predicted Secondary structure  ............








....























Query SS confidence  . . . . . . . . . . . .














. . . .












































Query Sequence  . . . . . . . . . . . . RFKNLWLNTGHGTLG. . . . WTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLH
Query Conservation  ............       
 
  
 
....   

  
  

 

 
             

       
     
Alig confidence  ............














....












































Template Conservation              
   
  

  
     
 



  

  

  

  

                         
Template Sequence  GILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTT
Template Known Secondary structure  TGGGTT

BTT
SGGG
SSSTTSTTSS
GGGSS





SSS







Template Predicted Secondary structure 


































Template SS confidence 











































































   405....410.........420.........430.........440.........450.........460.........470.........480
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions