Job Description P0A6J5 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 12 Aligned Residues 357 % Identity 20% Template c1ryiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycine oxidase; PDBTitle: structure of glycine oxidase with bound inhibitor glycolate Resolution 1.80 Å

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		1	.					.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		M	R	.	.	.	.	V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																																.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	R	H	Y	E	A	V	V	I	G	G	G	I	I	G	S	A	I	A	Y	Y	L	A	K	E	N	K	N	T	A	L	F	E	S	G	T	.	M	G	G	R	T	T	S	A	A	A	G	M	L	G	A	H	A	E	C	E	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S										S													T	T								S	S	S	.	T	T	T	T								B			G	G	G			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	L	D	G	T	Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T	R	D	I	A	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	F	F	D	F	A	M	H	S	Q	R	L	Y	K	G	L	G	E	E	L	Y	A	L	S	G	V	D	I	R	Q	H	N	G	G	M	F	K	L	A	F	S	E	E	D	V	L	Q	.	.	.	.	.	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T																B									S	S							.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Template SS confidence
																											60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G	E	Q	I	Y	G
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		Q	M	D	D	L	D	S	V	S	W	Y	S	K	E	E	V	L	E	K	E	P	Y	A	S	G	D	I	F	G	.	.	.	A	S	F	I	Q	D	D	V	H	V	E	P	Y	F	V	C	K	A	Y	V	K	A	A	K	M	L	G	A	E	I	F	E	H	T	P	V	L	H	V	E	R	D	G	E	A	L	F	I
Template Known Secondary structure		T	T	T	T	S	T	T														T	T	S		T	T				.	.	.					T	T			B																	T	T					T	T									S	S	S	S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	C	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G	S	Y	S	T	A	M	L	K	G	I	V	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	A	Q	E	D	G	A	P	V	S	T	I	L	D	E	T	Y	K	I	A	I	T	R	F	D	N	R	I	R	V	G	G	M	A	E	I
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		K	T	P	S	G	D	V	W	A	N	H	V	V	V	A	S	G	V	W	S	G	M	F	F	K	Q	L	G	L	N	N	A	F	L	P	V	K	G	E	C	L	S	V	W	N	D	D	I	P	L	T	K	T	.	.	.	L	Y	H	D	H	C	Y	I	V	P	R	K	S	G	R	L	V	V	G	A	T	M	K	P
Template Known Secondary structure				T	T													G	G	G	T							T	T																			S	S				S		.	.	.				T	T							T	T	S
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	H	V	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D	G	T	P	V	V	G	R	T	R	.	F	K	N	L	W	L	N	T	G	H	G	T	L	G	W	T	M	A	C	G	S	G	Q	L	L	S
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		G	D	W	S	E	T	P	D	L	G	G	L	E	S	V	M	K	K	A	K	T	M	L	P	A	I	Q	N	M	K	V	D	R	F	W	A	G	L	R	P	G	T	K	D	G	K	P	Y	I	G	R	H	P	E	D	S	R	I	L	F	A	A	G	H	F	R	N	G	I	L	L	A	P	A	T	G	A	L	I	S
Template Known Secondary structure		T					S																		G	G	G	G	G	S														T	T	S								T	T											S	S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		396	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	L	L	S	G	R	T	P	A	I	P	.	Y	E	D	L	S	V	A	R
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		D	L	I	M	N	K	E	V	N	Q	D	W	L	H	A	F	R	I	D	R
Template Known Secondary structure					T	T											T		S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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