Job Description P0A6J5 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 1 Aligned Residues 357 % Identity 24% Template c1pj6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:n,n-dimethylglycine oxidase; PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.											.
Query SS confidence																										.											.
Query Sequence		R	V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	.	V	T	V	I	D	R	E	P	G	A	.	A	L	E	T	S	A	A	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	F	Q	R	H	A	P	L	A	V	R	L
Query Conservation																										.											.
Alig confidence																										.											.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	V	I	I	G	A	G	I	V	G	T	N	L	A	D	E	L	V	T	R	G	W	N	N	I	T	V	L	D	Q	G	P	L	N	M	P	G	G	S	T	S	H	A	P	G	L	V	F	Q	T	N	P	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S													T	T									S	S		T	T				S	G	G	G	G										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	T	Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T	R	D	I	A	V	L	E	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	A	S	F	A	K	Y	T	V	E	K	L	L	S	L	T	E	D	.	.	G	V	S	C	F	N	Q	V	G	G	L	E	V	A	T	T	E	T	R	L	A	D	L	K	R	K	L	G	Y	A	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	.	.	T			S											S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
																													61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G	E	Q	I	Y	G	V	K	C
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		W	G	I	E	G	R	L	L	S	P	A	E	C	Q	E	L	Y	P	L	L	D	G	.	.	E	N	I	L	G	G	L	H	V	P	S	D	G	L	A	S	A	A	R	A	V	Q	L	L	I	K	R	T	E	S	A	G	V	T	Y	R	G	S	T	T	V	T	G	I	E	Q	S	G	G	R	V	T	G	V	Q	T
Template Known Secondary structure			T																T	T	S		G	.	.	G	G								T	T																				T	T						S										T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																												.																	.	.	.	.	.	.	.	.
Query SS confidence																												.																	.	.	.	.	.	.	.	.
Query Sequence		G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G	S	Y	S	T	A	M	L	K	G	I	V	.	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	.	.	.	.	.	.	.	.	A	Q	E	D	G	A	P	V	S	T	I	L	D	E	T	Y	K	I	A	I	T	R	F	D	N	R	I	R	V
Query Conservation																												.																	.	.	.	.	.	.	.	.
Alig confidence																												.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	G	V	I	P	A	D	I	V	V	S	C	A	G	F	W	G	A	K	I	G	A	M	I	G	M	A	V	P	L	L	P	L	A	H	Q	Y	V	K	T	T	P	V	P	A	Q	Q	G	R	N	D	Q	P	N	G	A	R	L	P	I	L	R	H	Q	D	Q	D	L	Y	Y	R	E	H	G	D	R	Y	G	I
Template Known Secondary structure		T	T						S							G	G	G							T	T	T																S			G	G	G	T	T	T	S		T	T	T				S						G	G	G	T							T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		311	.																						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	E	I	V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	H	V	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D	G	T	P	V	V	G	R	T	R
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	Y	A	H	R	P	M	P	V	D	V	D	T	L	G	A	Y	A	P	E	T	V	S	E	H	H	M	P	S	R	L	D	F	T	L	E	D	F	L	P	A	W	E	A	T	K	Q	L	L	P	A	L	A	D	S	E	I	E	D	G	F	N	G	I	F	S	F	T	P	D	G	G	P	L	L	G	E	S	K
Template Known Secondary structure						S				B			G	G	G	S					G	G	G		B	T	T	B	S	T	T																					G	G	G	G	G	S														T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	F	K	N	L	W	L	N	T	G	H	G	T	L	G	W	T	M	A	C	G	S	G	Q	L	L	S	D	L	L	S	G	R	T	P	A	I	P	Y	E	D	L	S	V	A	R	Y	S	R
Query Conservation		.
Alig confidence		.											.	.	.
Template Conservation													.	.	.
Template Sequence		E	L	D	G	F	Y	V	A	E	A	V	.	.	.	W	V	T	H	S	A	G	V	A	K	A	M	A	E	L	L	T	T	G	R	S	E	T	D	L	G	E	C	D	I	T	R	F	E	D
Template Known Secondary structure		S	S	B	T						S		.	.	.		G	G	G															S	S		S	S			T	T	T	B	G	G	G	S		G
Template Predicted Secondary structure													.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.