Job Description P0A6J5 Confidence 99.70% Date Thu Jan 5 11:03:18 GMT 2012 Rank 40 Aligned Residues 391 % Identity 12% Template c1f8sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-amino acid oxidase; PDBTitle: crystal structure of l-amino acid oxidase from calloselasma2 rhodostoma, complexed with three molecules of o-aminobenzoate. Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.
Predicted Secondary structure																																											.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.																											.	.	.	.	.	.
Query Sequence		R	V	V	I	L	G	S	G	V	V	G	V	A	S	A	W	Y	L	N	Q	A	G	H	E	V	T	V	I	D	R	E	P	G	A	A	L	E	T	S	A	A	.	.	.	.	N	A	G	Q	I	S	P	G	Y	A	A	P	W	A	A	P	G	V	P	L	K	A	I	K	W	M	.	.	.	.	.	.	F	Q	R
Query Conservation																																											.	.	.	.																											.	.	.	.	.	.
Alig confidence																																											.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	V	I	V	G	A	G	M	A	G	L	S	A	A	Y	V	L	A	G	A	G	H	Q	V	T	V	L	E	A	S	E	R	P	G	G	R	V	R	T	Y	R	N	E	E	A	G	W	Y	A	N	L	G	P	M	R	L	P	E	K	H	R	I	V	R	E	Y	I	R	K	F	D	L	R	L	N	E	F	S	Q
Template Known Secondary structure									B													T	T								S	S	S	S	S	B	T	T							T	T	T	T					S	S						T	T											T	T								S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	P	L	A	V	R	L	D	G	T	Q	F	Q	L	K	W	M	W	Q	M	L	R	N	C	D	T	S	H	Y	M	E	N	K	G	R	M	V	R	L	A	E	Y	S	R	D	C	L	K	A	L	R	A	E	T	N	I	Q	Y	E	G	R	Q	G	G	T	L	Q	L	F	R	T	E	Q	Q	Y	E	N	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	D	N	A	W	Y	F	I	K	N	I	R	K	K	V	G	E	V	K	K	D	P	G	L	L	K	Y	P	V	K	P	S	E	A	G	K	S	A	G	Q	L	Y	E	E	S	L	G	K	V	V	E	E	L	K	R	T	N	C	S	Y	I	L	N	K	Y	D	T	Y	S	T	K	E	Y	L	I	K	E	G	D
Template Known Secondary structure				T	T	S					T	T												G	G	G	G						T	T	T	T	T											T										S									G	G	G	S	B								T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	A	V	L	E	D	A	G	V	P	Y	Q	L	L	E	S	S	R	L	A	E	V	E	P	A	L	A	E	V	A	H	K	L	T	G	G	L	Q	L	P	N	D	E	T	G	D	C	Q	L	F	T	Q	N	L	A	R	M	A	E	Q	A	G	V	K	F	R	F	N	T	P	V	D	Q	L	L	C	D	G
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		L	S	P	G	A	V	D	M	I	G	D	L	L	N	E	D	S	G	Y	Y	V	S	F	I	E	S	L	K	H	D	D	I	F	A	Y	E	K	R	F	D	E	I	V	D	G	.	.	.	.	.	.	M	D	K	L	P	T	A	M	Y	R	D	I	Q	D	K	V	H	F	N	A	Q	V	I	K	I	Q	Q	N	D
Template Known Secondary structure														T	T		G	G	G	T	T	S	B												T	T								T	T		.	.	.	.	.	.	T	T										T	G	G	G			S	S										S
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.												.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		E	Q	I	Y	G	V	K	C	.	.	.	.	G	D	E	V	I	K	A	D	A	Y	V	M	A	F	G	.	.	.	.	.	.	.	.	.	.	.	S	Y	S	T	A	M	L	K	G	I	V	D	I	P	V	Y	P	L	K	G	Y	S	L	T	I	P	I	A	.	.	.	Q	E	D	G	A	P	V	S	T	I	L
Query Conservation										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Alig confidence										.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation
Template Sequence		Q	K	V	T	V	V	Y	E	T	L	S	K	E	T	P	S	V	T	A	D	Y	V	I	V	C	T	T	S	R	A	V	R	L	I	K	F	N	P	P	L	L	P	K	K	A	H	A	L	R	S	V	H	Y	R	S	G	T	K	I	F	L	T	C	T	T	K	F	W	E	D	D	G	I	H	G	G	K	S	T	T
Template Known Secondary structure		S									S	S	S								S						S						T	T	S				S																										S	S		G	G	G	G	G	T			S	S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.							.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query Sequence		D	E	T	Y	K	I	A	I	T	R	F	D	N	R	.	.	.	.	.	.	.	I	R	V	G	G	M	A	E	I	V	G	F	N	T	E	L	L	Q	P	R	R	E	T	L	E	M	V	V	R	D	L	Y	P	R	G	G	.	.	.	.	.	.	H	V	E	Q	A	T	F	W	T	G	L	R	P	M	T	P	D
Query Conservation																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	P	S	R	F	I	Y	Y	P	N	H	N	F	T	N	G	V	G	V	I	I	A	Y	G	I	G	D	D	A	N	F	F	Q	A	L	D	F	K	D	C	A	D	I	V	F	N	D	L	S	L	I	H	Q	L	P	K	K	D	I	Q	S	F	C	Y	P	S	V	I	Q	K	W	S	L	D	K	Y	A	M	G
Template Known Secondary structure		S	S	T	T							S	S			T	T											T								T	S																	T	T																		G	G	G		T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		361	.	.	.	.	.												.	.	.	370	.	.	.	.	.	.	.				.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		G	T	P	V	V	G	.	.	.	.	.	.	.	.	.	.	.	R	T	R	F	K	N	L	W	L	N	T	.	.	.	G	H	G	T	L	G	W	T	M	A	C	G	S	G	Q	L	L	S	D	L	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		G	I	T	T	F	T	P	Y	Q	F	Q	H	F	S	D	P	L	T	A	S	Q	G	R	I	Y	F	A	G	E	Y	T	A	Q	A	H	G	W	I	D	S	T	I	K	S	G	L	R	A	A	R	D	V
Template Known Secondary structure		S						T	T													B	T	T					S	G	G	G	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480