 |
Job Description | P18775 | Confidence | 99.95% | Date | Wed Jan 25 15:20:41 GMT 2012 |
Rank | 35 | Aligned Residues | 117 |
% Identity | 26% | Template | d2jioa1 |
SCOP info | Double psi beta-barrel
| ADC-like
| Formate dehydrogenase/DMSO reductase, C-terminal domain
|
Resolution | 2.2 |
|
 |
  |   |
687 | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | |
|
. | 710 | . | . | . | . | . | . | . | . | . | 720 | . | |
. | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | L | N | K | Q | Y | P | L | Q | L | T | G | F | H | Y | K | S | R | V | H | S | . |
. |
T | Y | G | N | V | D | V | L | K | A | A | C | R | . |
Q | E | M | W | I | N | P | L | D | A | Q | K | R | G | I | H | N | G | D | K | V | R | I | F | N | D | R | G | E | V | H | I | E | A | K | V | T | P | R | M | M | P |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
| . | . |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
E | E | P | D | A | E | Y | P | L | Y | L | T | S | M | R | V | I | D | H | W | H | T | A | T | M | T | G | K | V | P | E | L | Q | K | A | N | P | I | A | F | V | E | I | N | E | E | D | A | A | R | T | G | I | K | H | G | D | S | V | I | V | E | T | R | R | D | A | M | E | L | P | A | R | V | S | D | V | C | R | P |
Template Known Secondary structure |   |
S |
|
|
| S | S | S |
|  |  |  |  |  |  |
|
| T | T |
|
| T | T | S | S | S | G | G | G |
| G | G | G | G | S | S |
|
| S |
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|
| T | T |
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  | S | S | S |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
603 | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . |
  |
  |   |
764 | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | V | A | L | G | E | G | A | W | Y | D | P | D | A | K | R | V | D | K | G | G | C | I | N | V | L | T | T | Q | R | P | S | P | L | A | K | G | N | P | S | H | T | N | L | V | Q | V | E | K |
Query Conservation |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|   |   |   |
|   |
|
|
|
Template Sequence |   |
G | L | I | A | V | P | F | F | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | K | L | V | N | K | L | F | L | D | A | T | D | P | V | S | R | E | P | E | Y | K | I | C | A | A | R | V | R | K |
Template Known Secondary structure |   |
T |  |  |  |  |  |
|
|
| T | . | . | . | . | . | . | . | . | . | . | T | S |
| G | G | G | T | S |
|
|
| B |
| T | T | T |
|
| B |
| T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
683 | . | . | . | . | . | . | 690 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|