|   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | A | Y | D | I | I | A | T | N | M | Q | R | L | I | K | E | Y | G | N | E | S | I | Y | L | N | Y | G | T | G | T | L | G | G | T | M | T | R | S | W | P | P | G | N | T | L | V | A | R | L | M | N | C | C | G | G | Y | L | N | H | Y | G | D | Y | S | S | A | Q | I | A | E | G | L | N | Y | T | Y | G | G | W |
Query Conservation |   |
|
|
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . |   |   |
|
|   |
|   | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
Template Sequence |   |
E | A | A | A | K | L | I | A | D | S | F | K | Q | . |
. |
. |
. |
. |
. |
G | G | K | V | L | S | C | . |
. |
. |
. |
. |
. |
. |
. |
G | N | G | G | S | H | C | D | A | M | H | F | A | E | E | L | T | G | R | Y | R | E | N | R | P | G | Y | P | G | I | A | I | D | Y | V | F | S | R | Y | V | E | A | V | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | T |
|
|  |  |  |  | . | . | . | . | . | . | . | . |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S | S |
| S |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
  |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
A | D | G | N | S | P | S | D | I | E | N | S | K | L | V | V | L | F | G | N | N | P | G | E | T | R | M | S | G | G | G | V | T | Y | Y | L | E | Q | A | R | Q | K | S | N | A | R | M | I | I | I | D | P | R | Y | T | D | T | G | A | G | R | E | D | E | W | I | P | I | R | P | G | T | D | A | A | L | V | . |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |
|
|   |
|
|   |
|   |
|
|
|
|   |
|
|   | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|   |
| . | . | . | . | . | . |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | K | G | D | V | L | F | G | L | . |
. |
. |
. |
. |
. |
S | T | S | G | N | S | G | N | I | L | K | A | I | E | A | A | K | A | K | G | M | K | T | I | A | L | T | G | K | D | G | G | K | M | A | G | L | A | D | V | E | I | R | V | P | H | F | G | Y | A | D | R | I | Q | E | V |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |  | . | . | . | . | . | . |  | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  | T | T |
| G | G | G | T | T | T | S | S |  |  |  |  |  | S |
|
| S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
109 | 110 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
  |   |
|
298 | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
N | G | L | A | Y | V | M | I | T |
Query Conservation |   |
. |
|
|
|   |   |   |
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |   |
Template Sequence |   |
H | I | K | I | I | H | I | I | I | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . |
  |