 |
| Job Description | P18775 | | Confidence | 25.28% | Date | Wed Jan 25 15:20:41 GMT 2012 |
| Rank | 155 | Aligned Residues | 24 |
| % Identity | 25% | Template | d1hmja_ |
| SCOP info | RPB5-like RNA polymerase subunit
| RPB5-like RNA polymerase subunit
| RPB5
|
| Resolution | UNK |
|
| | |
722 | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . |
| Predicted Secondary structure | |
|  | | |  |
|  | | | | | | |
|
|
|
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | E | M | W | I | N | P | L | D | A | Q | K | R | G | I | H | N | G | D | K | V | R | I | F |
| Query Conservation | |
| |
| |
|
|
| |
|
| | |
|
|
| |
|
|
| |
| |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | |
|
|
|
|
|
|
| |
| |
| |
|
|
|
|
|
| |
| Template Sequence | |
P | K | I | Y | E | D | D | P | V | I | Q | E | I | G | A | K | E | G | D | V | V | R | V | I |
| Template Known Secondary structure | |
S | | | | T | T |
| | | | | | T | T |
|
| T | T |
| | | | | |
| Template Predicted Secondary structure | |
|
| | |
|
|
| | | | | |
|
|
|
|
|
|
| | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
