Job Description P18775 Confidence 49.40% Date Wed Jan 25 15:20:41 GMT 2012 Rank 111 Aligned Residues 112 % Identity 9% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	M	Q	R	L	I	K	E	Y	G	N	E	S	I	Y	L	N	Y	G	T	G	T	L	G	G	T	M	T	R	S	W	P	P	G	N	T	L	V	A	R	L	M	N	C	C	G	G	Y	L	N	H	Y	G	D	Y	S	S	A	Q	I	A	E	G	L	N	Y	T	Y	G	G	W	A	D	G	N	S	P	S	D
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	I	E	A	A	V	E	A	I	R	A	D	H	V	I	V	V	.	.	.	.	.	.	.	.	G	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	I	R	T	T	V	L	T	E	G	G	S	T	L	T	I	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure														S						.	.	.	.	.	.	.	.			G	G	G														T	T										T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	S	K	L	V	V	L	F	G	N	N	P	G	E	T	R	M	S	G	G	G	V	T	Y	Y	L	E	Q	A	R	Q	K	S	N	A	R	M	I	I	I	D	P	R	Y	T	D	T	G	A	G	R	E	D	E	W	I	P	I	R
Query Conservation
Alig confidence													.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		L	R	P	T	D	L	X	I	G	V	S	.	.	.	.	.	.	V	W	R	Y	L	R	D	T	V	A	A	L	A	G	A	A	E	R	G	V	P	T	X	A	L	T	D	S	S	V	S	P	P	A	R	I	A	D	H	V	L	V	A	A
Template Known Secondary structure				T	T								.	.	.	.	.	.		S	S															T	T								S		T	T	S							S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions