Return to main results Retrieve Phyre Job Id

Job DescriptionP18775
Confidence36.12%DateWed Jan 25 15:20:41 GMT 2012
Rank135Aligned Residues153
% Identity16%Templatec3lq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene2 1-carboxylic acid synthase/2-oxoglutarate decarboxylase3 from listeria monocytogenes str. 4b f2365
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190......... 200.........210.........220....
Predicted Secondary structure 

















...












Query SS confidence 



















































. . .
























Query Sequence  ATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLN. . . HYGDYSSAQIAEGLNYTYGGWADGN
Query Conservation 
 

  
    
   
    
 
                   
    
    ...     
            
      
Alig confidence 



























........















...
























Template Conservation                  


 

     
........   
  


 
  

  
                
  
      
Template Sequence  DSSIQKMVTECTGKKGVFVVGPIDKKEL. . . . . . . . EQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEA
Template Known Secondary structure  TTTS

S


TT
........T


GGGSTTSBSS

SS

TTS
Template Predicted Secondary structure 







........


























Template SS confidence 















































































   209210.........220.........230...... ...240.........250.........260.........270.........280
 
   225....230.........240.........250.........260.........270.........280.........290.........300....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  SPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGLAYVM
Query Conservation     
   

 

  
 
                      









 
 
 
  

 

 
 



 

 


   
Alig confidence 


























........


















...






















Template Conservation         

 

 

            ........        
 

       ...        
  
    
  
   
Template Sequence  EIIDKLTPEVVIRFGSMPVSKPLKNWL. . . . . . . . EQLSDIRFYVVDPGAAWKD. . . PIKAVTDMIHCDERFLLDIMQQN
Template Known Secondary structure  T

SSS

S
........

SS
TT




...TT


S
S
Template Predicted Secondary structure 















........











...







Template SS confidence 















































































   281........290.........300....... ..310.........320...... ...330.........340.........
 
   305....310.........
Predicted Secondary structure 





Query SS confidence 














Query Sequence  ITENLVDQAFLDKYC
Query Conservation 
     
  

   
Alig confidence 














Template Conservation                 
Template Sequence  MPDDAKDAAWLNGWT
Template Known Secondary structure  S
STT

Template Predicted Secondary structure 






Template SS confidence 














   350.........360....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions