Job Description P18775 Confidence 40.26% Date Wed Jan 25 15:20:41 GMT 2012 Rank 128 Aligned Residues 190 % Identity 12% Template c3fkjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerases; PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution Resolution 2.12 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	D	I	I	A	T	N	M	Q	R	L	I	K	E	Y	G	N	E	S	I	Y	L	N	Y	G	T	G	T	L	G	G	T	M	T	R	S	W	P	P	G	N	T	L	V	A	R	L	M	N	C	C	G	G	Y	L	N	H	Y	G	D	Y	S	S	A	Q	I	A	E	G	L	N	Y	T	Y	G	G	W	A	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.											.
Template Conservation																										.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.											.
Template Sequence		A	H	E	N	A	R	R	I	I	S	D	I	L	G	K	Q	N	I	E	R	V	W	F	V	.	.	.	.	.	.	.	.	.	G	C	G	G	S	L	T	G	F	W	P	G	K	Y	F	L	D	C	E	A	S	K	L	A	V	G	Y	I	T	.	.	.	.	.	.	.	S	N	E	F	V	H	A	T	P	K	.
Template Known Secondary structure															T	T	S									.	.	.	.	.	.	.	.	.		S	T					T	T												S	S								.	.	.	.	.	.	.							S			T	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.											.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		G	N	S	P	S	D	I	E	N	S	K	L	V	V	L	F	G	N	N	P	G	E	T	R	M	S	G	G	G	V	T	Y	Y	L	E	Q	A	R	Q	K	S	N	A	R	M	I	I	I	D	P	R	Y	T	D	T	G	A	G	R	E	D	E	W	I	P	I	R	P	G	T	D	A	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.												.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.												.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	L	G	K	N	S	V	V	I	L	A	.	.	.	.	.	.	S	Q	Q	G	N	T	A	E	T	V	A	A	A	R	V	A	R	E	K	G	A	A	T	I	G	L	V	Y	Q	P	D	T	P	L	C	E	Y	S	D	Y	I	I	E	Y	Q	W	A	R	Y	P	E	T	V	D	P	A	Q	Q
Template Known Secondary structure		.	.	.	.	.	T		S	T	T							.	.	.	.	.	.		S	S	S																T								S	S	T	T						T		S						B				T	T	S				G	G	G	B
Template Predicted Secondary structure		.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
							67	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
					295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	L	V	N	G	L	A	Y	V	M	I	T	E	N	L	V	D	Q	A	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A	S	A	P	K	N	G	H	Y	K	A	Y	I	L	G	E	G	P	D	G	V	A	K	T	P	E	W	A	S	Q	I	T	G	V	P	A	D	K	I	I	K	L	A
Query Conservation		.	.	.
Alig confidence		.	.	.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	A	Y	S	L	W	L	A	L	E	I	L	A	Q	T	E	G	Y	A	Q	.	.	Y	D	E	L	V	S	A	F	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	D	V	V	H	G	A	Q	R	Q	V	Q	E	D	A	Q	R	F	A
Template Known Secondary structure																		T			T	T	.	.										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.																												.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	G	S	T	K	P	A	F	I	S	Q	G	W	G	P	Q	R
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		A	E	W	K	D	.	E	K	V	V	Y	X	X	G	S	G	P	S	F
Template Known Secondary structure					T	T	.		S								G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		187	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions