Job Description P18775 Confidence 88.71% Date Wed Jan 25 15:20:41 GMT 2012 Rank 71 Aligned Residues 149 % Identity 10% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	Y	D	I	I	A	T	N	M	Q	R	L	I	K	E	Y	G	N	E	S	I	Y	L	N	Y	G	T	G	T	L	G	G	T	M	T	R	S	W	P	P	G	N	T	L	V	A	R	L	M	N	C	C	G	G	Y	L	N	H	Y	G	D	Y	S	S	A	Q	I	A	E	G	L	N	Y	T	Y	G	G	W
Query Conservation
Alig confidence																			.	.								.	.	.	.	.	.	.	.
Template Conservation																			.	.								.	.	.	.	.	.	.	.
Template Sequence		P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	.	.	G	N	K	I	L	C	C	.	.	.	.	.	.	.	.	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R
Template Known Secondary structure																		T	.	.	T							.	.	.	.	.	.	.	.		S	T															T		S	S	S										S	S										T	T	S	T
Template Predicted Secondary structure																			.	.								.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.									.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		221	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure										.	.	.	.	.																																																						.	.	.
Query SS confidence										.	.	.	.	.																																																						.	.	.
Query Sequence		A	D	G	N	S	P	S	D	.	.	.	.	.	I	E	N	S	K	L	V	V	L	F	G	N	N	P	G	E	T	R	M	S	G	G	G	V	T	Y	Y	L	E	Q	A	R	Q	K	S	N	A	R	M	I	I	I	D	P	R	Y	T	D	T	G	A	G	R	.	.	.	E	D	E	W	I	P	I	R	P	G	T
Query Conservation										.	.	.	.	.																																																						.	.	.
Alig confidence										.	.	.	.	.												.	.	.	.	.	.																																					.	.	.								.
Template Conservation																										.	.	.	.	.	.																																															.
Template Sequence		L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	.	.	.	.	.	.	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	.	P	S	H
Template Known Secondary structure		T	G	G	G	T	T										T	T								.	.	.	.	.	.	S	S	S															T	T									T	T										T	T							.	S		S
Template Predicted Secondary structure																										.	.	.	.	.	.																																															.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.
		293	.	.					.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		D	A	A	.	.	.	.	L	V	N	G	L	A	Y	V	M	I	T
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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