 |
Job Description | P18775 | Confidence | 47.29% | Date | Wed Jan 25 15:20:41 GMT 2012 |
Rank | 113 | Aligned Residues | 70 |
% Identity | 16% | Template | c2ev2B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:hypothetical protein rv1264/mt1302; |
PDBTitle: structure of rv1264n, the regulatory domain of the mycobacterial2 adenylyl cylcase rv1264, at ph 8.5
|
Resolution | 2.35 Å |
|
 |
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | D | A | A | L | V | N | G | L | A | Y | V | M | I | T | E | N | L | V | D | Q | A | F | L | D | K | Y | C | V | G | Y | D | E | K | T | L | P | A | S | A | P | K | N | G | H | Y | K | A | Y | I | L | G | E | G | P | D | G | V | A | K | T | P | E | W | A | S | Q | I | T | G | V | P | A | D | K | I | I | K | L |
Query Conservation |   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|
|
|   |
|
|
|
|   |
|   |
|   |
|   |
Template Sequence |   |
G | T | A | R | A | E | R | A | K | L | V | E | W | L | L | E | Q | G | I | T | P | D | E | I | R | A | T | N | P | P | L | L | L | A | T | R | H | L | V | G | D | D | G | T | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | S | A | R | E | I | S | E | N | Y | G | V | D | L | E | L | L | Q | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | S | S | S |
| G | G | G | G | T | G | G | G | G | T |
|
| S |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
371 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
A | R | E | I | G |
Query Conservation |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
Template Sequence |   |
Q | R | A | V | G |
Template Known Secondary structure |   |
 |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
87 | . | . | 90 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|