Job Description P18775 Confidence 45.58% Date Wed Jan 25 15:20:41 GMT 2012 Rank 118 Aligned Residues 186 % Identity 12% Template c2amlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution Resolution 1.50 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		E	A	Y	D	I	I	A	T	N	M	Q	R	L	I	K	E	.	.	.	.	.	.	Y	G	N	E	S	I	Y	L	N	Y	G	T	G	T	L	G	G	T	M	T	R	S	W	P	P	G	N	T	L	V	A	R	L	M	N	C	C	G	G	Y	L	N	H	Y	G	D	Y	S	S	A	Q	I	A	E	G	L	N	Y
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.										.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		E	X	C	R	V	I	L	A	D	F	Q	T	N	A	E	K	L	E	S	L	V	K	N	G	A	K	E	W	L	I	L	.	.	.	.	.	.	.	.	A	T	G	S	S	L	N	A	A	Q	S	A	K	Y	Y	I	E	N	L	A	D	V	R	I	T	I	E	E	P	F	N	H	L	Y	Y	.	.	.	.	.	.
Template Known Secondary structure																							T	T			S						.	.	.	.	.	.	.	.																				S	S															.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	Y	G	G	W	A	D	G	N	S	P	S	D	I	E	N	S	K	L	V	V	L	F	G	N	N	P	G	E	T	R	M	S	G	G	G	V	T	Y	Y	L	E	Q	A	R	Q	K	S	N	A	R	M	I	I	I	D	P	R	Y	T	D	T	G	A	G	R	E	D	E	W	I	P	I	R	P	G	T	D	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	E	K	L	S	S	H	L	D	L	V	I	G	I	S	Q	S	G	Q	S	T	.	.	.	.	S	T	I	S	A	L	E	R	V	K	K	E	A	S	V	P	V	V	A	L	T	S	D	V	T	S	E	I	A	E	F	A	D	I	T	L	D	I	G	S	G	K	E	R	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					T	T									S	S	S		B		.	.	.	.																						S		T	T	S	G	G	G	G	G		S						S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
													294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	A	L	V	N	G	L	A	Y	V	M	I	T	E	N	L	V	D	Q	A	F	L	D	K	Y	C	V	G	Y	D	E	K	T	L	P	A	S	A	P	K	N	G	H	Y	K	A	Y	I	L	G	E	G	P	D	G	V	A	K	T	P	E	W	A	S	Q	I	T	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	V	T	K	G	F	T	A	T	V	L	T	L	X	L	T	G	L	H	F	A	Y	K	T	V	Q	I	D	E	T	R	F	N	N	E	I	S	A	F	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	D	A	I	P	A	T	I	A	E
Template Known Secondary structure		S	S		S																					T	T	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																												.	.	.	190	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	K	I	I	K	L	A	R	E	I	G	S	T	K	P	A	F	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	A	F	Y	E	R	W	Q	E	E	F	A	T	A	P	K	F	T	A	I
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions