Return to main results Retrieve Phyre Job Id

Job DescriptionP75734
Confidence13.37%DateThu Jan 5 12:13:34 GMT 2012
Rank5Aligned Residues37
% Identity11%Templated2b6da1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100........
Predicted Secondary structure 








Query SS confidence 




































Query Sequence  VRVLDYQQCLRATQTGNDQAVKADCDKVWQEIRSNNK
Query Conservation 
 







 

 

      


 
 







 
Alig confidence 




































Template Conservation 
   
   

  
  
 

   

    
 
 
  
 
Template Sequence  ATASTTDDCIVLVLKGEADALNLDGGYIYTAGKCGLV
Template Known Secondary structure  SSTS


TT
Template Predicted Secondary structure 














Template SS confidence 




































   372.......380.........390.........400........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions