 |
Job Description | P75734 | Confidence | 5.34% | Date | Thu Jan 5 12:13:34 GMT 2012 |
Rank | 34 | Aligned Residues | 73 |
% Identity | 15% | Template | c1o4uA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; |
PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution
|
Resolution | 2.50 Å |
|
 |
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | C | A | Q | S | T | A | P | Q | E | D | S | R | L | K | E | A | Y | S | A | C | I | N | T | A | Q | G | . |
. |
. |
S | P | E | K | I | E | A | C | Q | S | V | L | N | V | L | K | K | E | K | Q | H | Q | Q | F | A | D | Q | E | S | V | R | V | L | D | Y | Q | Q | C | L | R | A | T | Q | T | G | N | D |
Query Conservation |   |
  |   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |
|   |
| . | . | . |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|   |
| . | . |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |
|
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|
Template Sequence |   |
I | A | A | T | R | K | I | L | P | . |
. |
G | L | G | V | L | Q | K | I | A | V | V | H | G | G | G | D | C | V | M | I | K | D | N | H | L | K | M | Y | G | S | A | E | R | A | V | Q | E | V | R | K | I | I | P | F | T | T | K | I | E | V | E | V | E | N | L | E | D | A | L | R | A | V | E | A | G | A | D |
Template Known Secondary structure |   |
 |  |
|
| S |
|
|
| T | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |
|  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|