Job Description P0AD68 Confidence 97.54% Date Thu Jan 5 11:20:08 GMT 2012 Rank 92 Aligned Residues 273 % Identity 18% Template d2drwa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.10

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A
Query Conservation
Alig confidence																			.													.	.										.	.	.	.	.	.	.	.
Template Conservation																			.													.	.										.	.	.	.	.	.	.	.
Template Sequence		S	D	L	N	N	A	I	Q	G	I	L	D	D	H	V	A	R	.	G	V	V	G	V	S	L	A	L	C	L	P	.	.	G	E	E	T	S	L	Y	Q	S	.	.	.	.	.	.	.	.	G	Y	A	D	K	F	N	K	M	P	M	T	G	D	H	L	F	R	I	A	S	C	T	K	S	F	I	A	T	G	L
Template Known Secondary structure																	T	T	.	T											T	.	.	T	S								.	.	.	.	.	.	.	.					T	T	T	T					T	T		B				G	G	G
Template Predicted Secondary structure																			.													.	.										.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		318				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	.	.	.	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		H	L	L	V	Q	D	G	T	V	D	L	D	E	P	I	T	R	.	.	.	.	.	.	.	.	W	F	P	D	L	P	K	A	A	Q	M	P	V	R	I	L	L	N	H	R	S	G	L	P	D	F	E	T	S	M	P	M	I	S	D	K	S	W	T	A	Q	E	I	V	D	F	S	F	R	H	G	V	Q	K	E
Template Known Secondary structure							T	T	S			T	T	S	B	G	G	G	.	.	.	.	.	.	.	.	T		T	T	S	T	T	G	G	G		B	G	G	G	G	T	T	T		S						T	T	T	S	B	S	S																		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.									.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
									360	.	.	.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.																											.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.													.	.	.	.	.	.									.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.													.	.	.	.	.	.									.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	N	V	G	V	S	K	L	A	L	A	M	.	.	.	.	.	.	P	S	S	A	L	V	D	T	.	.	Y	S	R	F	G	L	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	N	L	G	L	V	G	E	R	S
Query Conservation		.	.	.	.	.	.	.													.	.	.	.	.	.									.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.													.	.	.	.	.	.									.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	W	H	G	M	E	Y	S	N	T	G	Y	V	L	A	G	M	I	I	A	H	E	T	G	K	P	Y	S	D	H	L	R	S	R	I	F	A	P	L	G	M	K	D	T	W	V	G	T	H	E	T	F	P	I	E	R	E	A	R	G	Y	M	H	A	A	A	D	D	E	N	P	Q	W	D	V	S	G	A	G	D
Template Known Secondary structure		T	T	S	S					S															T	S										T					T			S				T	T	T					G	G	G	B									T	T			S		S	S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	D	G	V	W	D	S	T	E	W	F	P	L	S	G	A	N	A	A	G	D	M	V	S	T	P	R	D	I	V	K	F	L	N	A	L	F	D	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	D	Q	K	R	L	W	E	M	K	D	N	I	K	P	A	F	F	P	G
Template Known Secondary structure			B	T	T					T	T	T	S						G	G	G	T																		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										T	S							T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		479	480	.	.	.	.	.								.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.			.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																																																														.	.
Query SS confidence									.	.	.	.	.	.	.																																																														.	.
Query Sequence		G	G	G	V	K	A	A	.	.	.	.	.	.	.	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	.	.	A	P	V
Query Conservation									.	.	.	.	.	.	.																																																														.	.
Alig confidence									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.															.	.	.																					.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		S	N	T	V	A	N	G	H	G	L	L	L	M	R	Y	G	S	S	E	L	K	G	H	L	G	Q	I	.	.	.	.	.	.	.	.	.	.	.	P	G	H	T	S	I	M	G	R	D	E	E	T	G	.	.	.	A	A	L	M	L	I	Q	N	S	G	A	G	D	F	E	S	F	Y	L	K	G	V	N	E	P
Template Known Secondary structure		S							S	S							T	T											.	.	.	.	.	.	.	.	.	.	.	T	T									T	T	T		.	.	.								S				S	S	T	T	S					T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.												.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	A	I	M	G	G	V	L	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	R	V	L	E	A	I	K	N	S	R
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions