Job Description P0AD68 Confidence 96.88% Date Thu Jan 5 11:20:08 GMT 2012 Rank 98 Aligned Residues 234 % Identity 18% Template d2dcfa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.40

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	.	.	.	A	L	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N
Query Conservation																																																										.	.	.
Alig confidence							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	L	V	L	.	.	R	G	T	E	V	V	A	E	Y	Y	R	A	G	F	A	P	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	L	L	M	A	V	S	K	S	L	C	G	T	V	V	G	A	L	V	D	E	G	R	I	D	P	A	Q	P	V	T	E	Y	V	P	E	L	A
Template Known Secondary structure							.	.		T	T									T	T			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T																T	T	S			T	T	S	B	G	G	G	T		G	G	G	T
Template Predicted Secondary structure							.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360																																																							.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	G
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	S	V	Y	D	G	P	S	V	L	Q	V	L	D	M	Q	I	S	I	D	Y	N	E	D	Y	V	D	P	A	S	E	V	Q	T	H	D	R	S	A	G	W	R	T	R	R	H	G	D	P	A	D	T	Y	E	F	L	T	T	L	R	G	D	G	S	T	G	E	F	Q	Y	C	S	A	N
Template Known Secondary structure		T	.	.	.	.	.	.	S	T	T	S	S		B						T	T		B			S					S	S		T	T	S										T	S	S				T	T			S	S							T					S		B	S	S
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		146							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		364	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		V	S	K	L	A	.	.	.	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I
Query Conservation							.	.	.
Alig confidence							.	.	.															.													.	.	.	.	.	.	.	.	.	.
Template Conservation																								.													.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	V	L	A	W	I	V	E	R	V	T	G	L	R	Y	V	E	A	L	S	T	.	Y	L	W	A	K	L	D	A	D	R	D	A	.	.	.	.	.	.	.	.	.	.	T	I	T	V	D	T	T	G	F	G	F	A	N	G	G	V	S	C	T	A	R	D	L	A	R	V	G	R	M	M	L	D	G	G	V
Template Known Secondary structure															S									.		T	G	G	G	T	T		S	S			.	.	.	.	.	.	.	.	.	.				B		T	T			B		T	T	T																		T	T	T
Template Predicted Secondary structure																								.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.											.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.											470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	.	.	.	.	.	.	.	.	.	.	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	.	.	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																		.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	P	G	G	R	V	V	S	E	D	W	V	R	R	V	L	A	G	G	S	H	E	A	M	T	D	K	G	F	T	N	T	F	P	D	G	S	Y	T	R	Q	W	W	C	T	G	N	E	R	G	N	V	S	G	I	G	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		T	T				S														T	T	T											T	T					T	T							T	T								T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V
Query Conservation
Alig confidence		.	.	.													.	.
Template Conservation		.	.	.													.	.
Template Sequence		.	.	.	H	G	Q	N	L	W	L	D	P	L	T	D	.	.	S	V	I	V	K	L	S	S	W	P	D	P	D	T	E	H	W	H	R	L	Q	N	G	I	L	L	D	V	S	R	A	L
Template Known Secondary structure		.	.	.	T	T							G	G	G	T	.	.										S	S	S	S																			T
Template Predicted Secondary structure		.	.	.													.	.
Template SS confidence
					346	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions