Job Description P0AD68 Confidence 99.94% Date Thu Jan 5 11:20:08 GMT 2012 Rank 41 Aligned Residues 250 % Identity 20% Template d2cc1a1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.13

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	.	.	.	Q	R
Query Conservation																																																																													.	.	.
Alig confidence																			.														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																			.														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	D	Q	L	A	E	L	E	R	R	D	N	V	L	I	G	.	L	Y	A	A	N	L	Q	S	G	R	R	I	T	.	.	.	.	.	.	H	R	P	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	A	M	C	S	T	F	K	G	Y	V	A	A	R	V	L	Q	M	A	E	H
Template Known Secondary structure														T					.						T	T	T						.	.	.	.	.	.		S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G															T
Template Predicted Secondary structure																			.														.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.																	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure															.																						.	.	.	.																			.
Query SS confidence															.																						.	.	.	.																			.
Query Sequence		G	V	V	R	E	N	S	V	L	N	T	I	P	.	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	.	.	.	.	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P	.	S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V
Query Conservation															.																						.	.	.	.																			.
Alig confidence															.																						.	.	.	.																			.																	.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		G	E	I	S	L	D	N	R	V	F	V	D	A	D	A	L	V	P	N	S	P	V	T	E	A	R	A	G	A	E	M	T	L	A	E	L	C	Q	A	A	L	Q	R	S	D	N	T	A	A	N	L	L	L	K	T	I	G	G	P	A	A	V	T	A	F	A	R	S	V	G	D	E	R	T	.	.	.	.	.	.
Template Known Secondary structure		T	S	S		T	T							G	G	G			S	S						T	T	T	T	S														S														T												T	T			S		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	L	D	R	W	E	V	E	L	N	S	A	I	P	G	D	P	R	D	T	S	T	P	A	A	L	A	V	G	Y	R	A	I	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	S	P	P	Q	R	G	L	L	E	D	W	M	R	A	N
Template Known Secondary structure		.	.	.	.	.	.	.	.				S		T	T	G	G	G	G			T	T			T	T																	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M
Query Conservation
Alig confidence				.	.																						.	.	.	.	.	.	.	.																		.															.	.
Template Conservation				.	.																						.	.	.	.	.	.	.	.																		.															.	.
Template Sequence		Q	T	.	.	S	S	M	R	A	G	L	P	E	G	W	T	T	A	D	K	T	G	S	G	D	.	.	.	.	.	.	.	.	Y	G	S	T	N	D	A	G	I	A	F	G	P	D	G	Q	R	.	L	L	L	V	M	M	T	R	S	Q	A	H	D	P	.	.	K	A	E	N	L	R	P	L	I	G	E	L	T
Template Known Secondary structure		S		.	.		S	G	G	G	G	S		T	T											S	.	.	.	.	.	.	.	.	T	T											T	T	S			.										S	S	S		T	.	.	T
Template Predicted Secondary structure				.	.																						.	.	.	.	.	.	.	.																		.															.	.
Template SS confidence
		215	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.
		555	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V	L	R	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	V	L	P	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions