Job Description P0AD68 Confidence 100.00% Date Thu Jan 5 11:20:08 GMT 2012 Rank 13 Aligned Residues 324 % Identity 21% Template d2c5wb1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.55

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		S	S	T	D	S	Q	A	A	H	N	L	A	L	S	I	D	E	R	L	Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	.	.	.	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.																											.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		G	Y	N	L	L	T	T	G	M	D	V	Y	T	N	V	D	Q	E	A	Q	K	H	L	W	D	I	Y	N	T	D	E	Y	V	A	Y	P	D	D	E	L	Q	V	A	S	T	I	V	D	V	S	N	G	K	V	I	A	Q	L	G	A	R	H	Q	S	S	N	V	.	.	.	.	.	.	S	F	G	I	N	Q	A
Template Known Secondary structure		S			T	T	T	S																							S	S	S				S		S	S										T	T	T		B								S	S						.	.	.	.	.	.	T	T				T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																	.											.																.	.									.	.
Query SS confidence																	.											.																.	.									.	.
Query Sequence		I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	.	V	M	T	A	L	Q	R	G	V	V	.	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	.	.	H	E	I	K	D	V	A	R	.	.	Y	S	E	L	T	L	T	G	V	L	Q	K	S	S	N	V	G	V	S	K	L	A	L	A	M	P
Query Conservation																	.											.																.	.									.	.
Alig confidence																	.											.																.	.									.	.
Template Conservation
Template Sequence		V	E	T	N	R	D	W	G	S	T	M	K	P	I	T	D	Y	A	P	A	L	E	Y	G	V	Y	E	S	T	A	T	I	V	H	D	E	P	Y	N	Y	P	G	T	N	T	P	V	Y	N	W	D	R	G	Y	F	G	N	I	T	L	Q	Y	A	L	Q	Q	S	R	N	V	P	A	V	E	T	L	N	K	V	G
Template Known Secondary structure		T				S			G	G	G						T							T	T	S		S	B	S	S						S	S		B		T	T	S	S		B				T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																																																		.																				.
Query SS confidence																																																		.																				.
Query Sequence		S	S	A	L	V	D	T	Y	S	R	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	W	S	D	I	E	R	A	T	F	S	F	G	Y	G	.	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	.	I	Y	R	P	L	S	I	T	K	V	D
Query Conservation																																																		.																				.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																				.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	R	A	K	T	F	L	N	G	L	G	I	D	Y	P	S	I	H	Y	S	N	A	I	S	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	E	S	D	K	K	Y	G	A	S	S	E	K	M	A	A	A	Y	A	A	F	A	N	G	G	T	Y	Y	K	P	M	Y	I	H	K	V	V
Template Known Secondary structure											T	T	T		B		S	S			G	G	G	G	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			S	S	B	S															T	T	S						B	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.																.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		451									.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.							.	510	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	.	.	.	.	.	.	N	K	Y	I	A	Y	T	A
Query Conservation			.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																											.																															.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		F	S	D	G	S	E	K	E	F	S	N	V	G	T	R	A	M	K	E	T	T	A	Y	M	M	T	D	M	M	K	T	V	L	T	Y	.	G	T	G	R	N	A	Y	L	A	W	L	P	Q	A	G	K	T	G	T	S	N	Y	T	D	E	E	I	E	N	H	I	K	T	S	Q	F	V	A	P	D	E	L	F	A
Template Known Secondary structure			T	T	S													S																			.	S	T	T	G	G	G			T	T																				T				S	S				S
Template Predicted Secondary structure																																					.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	.	.	.	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L	R	T	M	N	I	E	P	D	A	L	T	T	G
Query Conservation																										.	.	.
Alig confidence				.	.	.	.																			.	.	.
Template Conservation				.	.	.	.
Template Sequence		G	Y	.	.	.	.	T	R	K	Y	S	M	A	V	W	T	G	Y	S	N	R	L	T	P	L	V	G	N	G	L	T	V	A	A	K	V	Y	R	S	M	M	T	Y	L	S	E	G	S	N	P	E	D	W	N	I	P	E	G
Template Known Secondary structure				.	.	.	.		S	S										S	S	T	T	S				G	G	G	G	G															S	S	S									T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		586	.					.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions