Job Description P0AD68 Confidence 96.70% Date Thu Jan 5 11:20:08 GMT 2012 Rank 99 Aligned Residues 262 % Identity 19% Template d1yqsa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.05

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Q	A	L	V	Y	R	E	L	N	N	A	V	A	F	N	K	A	E	S	G	S	A	V	L	V	D	V	N	T	G	E	V	L	A	M	A	N	S	P	S	Y	N	P	N	N	L	S	G	T	P	K	E	A	M	R	N	R	T	I	T	D	V	F	E	P	G	S	T	V	K	P	M	V	V	M	T	A	L	.	.
Query Conservation																																																																																.	.
Alig confidence																.													.	.								.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																.													.	.								.	.	.	.	.	.	.	.	.
Template Sequence		D	T	G	L	Q	A	V	L	H	T	A	L	S	Q	.	G	A	P	G	A	M	V	R	V	D	D	N	.	.	G	T	I	H	Q	L	S	.	.	.	.	.	.	.	.	.	E	G	V	A	D	R	A	T	G	R	A	I	T	T	T	D	R	F	R	V	G	S	V	T	K	S	F	S	A	V	V	L	L	Q	L
Template Known Secondary structure															T	.	T		S									T	.	.	T							.	.	.	.	.	.	.	.	.			B	S		T	T	T			B			T	T		B				G	G	G
Template Predicted Secondary structure																.													.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
			319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Q	R	G	V	V	R	E	N	S	V	L	N	T	I	P	Y	R	I	N	G	H	E	I	K	D	V	A	R	Y	S	E	L	T	L	T	G	V	L	Q	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	D	E	G	K	L	D	L	D	A	S	V	N	T	.	.	.	.	.	.	.	.	Y	L	P	G	L	L	P	D	D	R	I	T	V	R	Q	V	M	S	H	R	S	G	L	Y	D	Y	T	N	D	M	F	A	Q	T	V	P	G	F	E	S	V	R	N	K	V	F	S	Y	Q	D	L	I	T	L	S	L	K	H
Template Known Secondary structure				T	T	S			T	T	S	B				.	.	.	.	.	.	.	.		S	T	T		S	S		T	T		B						T	T		S					T					T	S	S									T	T														T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
														360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.						.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.												.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	N	V	G	V	S	K	L	A	.	.	.	L	A	M	P	S	S	A	L	V	D	T	Y	S	R	.	.	.	.	.	F	G	L	G	K	A	T	N	L	G	L	V	G	E	R	S	G	L	Y	P	Q	K	Q	R	.	.	.	.	.	.	.	.	.	.	.	W	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.															.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	T	N	A	P	G	A	A	Y	S	Y	S	N	T	N	F	V	V	A	G	M	L	I	E	K	L	T	G	H	S	V	A	T	E	Y	Q	N	R	I	F	T	P	L	N	L	T	D	T	F	Y	V	H	P	D	T	V	I	P	G	T	H	A	N	G	Y	L	T	P	D	E	A	G	G	A	L	V	D	S	T
Template Known Secondary structure				S	S	S	T	T	S																					S	S										T	T	T	T	T	T		T	T		B			T	T						S	S	B								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		D	I	E	R	A	T	F	S	F	G	Y	G	L	M	V	T	P	L	Q	L	A	R	V	Y	A	T	I	G	S	Y	G	I	Y	R	P	L	S	I	T	K	V	D	P	P	V	P	G	E	R	V	F	P	E	S	I	V	R	T	V	V	H	M	M	E	S	V	A	L	P	G	G	G	G	V	K	A	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																			.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Sequence		E	Q	T	V	S	W	A	Q	S	A	G	A	V	I	S	S	T	Q	D	L	D	T	F	F	S	A	L	M	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	M	S	A	A	Q	.	.	.	L	A	Q	M	Q	Q	W	T	T	V	N	S	T	Q	G	Y	G	L	G	L	R	R
Template Known Secondary structure						T	T	T	G	G	G	T																		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S					.	.	.					T							T	T					S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																			.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
				485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	I	K	G	Y	R	I	A	I	K	T	G	T	A	K	K	V	G	P	D	G	R	Y	I	N	K	Y	I	A	Y	T	A	G	V	A	P	A	S	Q	P	R	F	A	L	V	V	V	I	N	D	P	Q	A	G	K	Y	Y	G	G	A	V	S	A	P	V	F	G	A	I	M	G	G	V	L	R	T	M	N
Query Conservation		.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	S	C	G	I	S	V	Y	G	H	T	G	T	V	.	.	.	.	.	.	.	.	.	.	.	Q	G	Y	Y	T	Y	A	F	A	S	K	.	.	D	G	K	R	S	V	T	A	L	A	.	.	.	.	.	.	.	.	.	N	T	S	N	N	V	N	V	L	N	T	M	A	R	T	L	E	S	A	F	C
Template Known Secondary structure					T	T	S											.	.	.	.	.	.	.	.	.	.	.	T	T									T	.	.	T	S	S								.	.	.	.	.	.	.	.	.	S			S																	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.												.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.												.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		563	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions